Scaffold Ga0136547_109882

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0136547_109882

Scaffold Ga0136547_109882

Overview

Basic Information
Taxon OID	3300010381 Open in IMG/M
Scaffold ID	Ga0136547_109882 Open in IMG/M
Source Dataset Name	Methanogenic microbial communities from bioreactors in Yantai Institute of Oceanology, CAS, Yantai, China ? reactor 2
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Beijing Novogene Bioinformatics Technology Co., Ltd
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	785
Total Scaffold Genes	3 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Bioreactor → Methanogenic Microbial Communities From Bioreactors In Yantai Institute Of Oceanology, Cas, Yantai, China

Source Dataset Sampling Location
Location Name	Yantai academy of sciences oceanology institute, Yantai, China
Coordinates	Lat. (^o)	37.0	Long. (^o)	121.0	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F068418	Metagenome / Metatranscriptome	124	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0136547_1098822	F068418	N/A	VNSRIGDQVSLEFSDIDVKGTIESEGGSQRGDNLSNKSVQVSVGGSFDIEVSSADIIDGFVIEHNGDISVF*

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