Basic Information | |
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Taxon OID | 3300010232 Open in IMG/M |
Scaffold ID | Ga0136447_1026171 Open in IMG/M |
Source Dataset Name | Halite microbial communities from Salar Grande, Atacama Desert, Chile, 2016. Combined Assembly of Gp0154194 and Gp0154467 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Johns Hopkins Bayview Research CORES |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 3838 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Geologic → Unclassified → Unclassified → Evaporite → Halite Endoliths Microbial Communities Diversity Study |
Source Dataset Sampling Location | ||||||||
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Location Name | Salar Grande, Atacama desert, Chile | |||||||
Coordinates | Lat. (o) | -21.0011111 | Long. (o) | -70.07138889 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F027696 | Metagenome | 194 | N |
Protein ID | Family | RBS | Sequence |
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Ga0136447_10261711 | F027696 | GGAG | MSTTQLTQVATNIDEFEVNGDRAIDFDIAANTDYEIQSCVVVDENGRVVEAAVRFGRVKERSELGIGKPILASAWAKMVSEATDAEAVEGDLSDFGHIVPHLRIQRENVEEYGLETLSLKEFASVVAE |
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