Scaffold Ga0136160_1111341

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0136160_1111341

Scaffold Ga0136160_1111341

Overview

Basic Information
Taxon OID	3300010225 Open in IMG/M
Scaffold ID	Ga0136160_1111341 Open in IMG/M
Source Dataset Name	Sitobion avenae (English Grain Aphid) hemolymph microbial communities from Shanxi Taiyuan, China - Region1
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DNAVision
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	3265
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → Viruses → Predicted Viral	(Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Endosymbionts → Bacteria → Unclassified → Unclassified → Wheat → Sitobion Avenae (English Grain Aphid) Hemolymph Microbial Communities From Shanxi Taiyuan, China - Region1

Source Dataset Sampling Location
Location Name	Shanxi Taiyuan, China
Coordinates	Lat. (^o)	37.87	Long. (^o)	112.54	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F029983	Metagenome	186	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0136160_11113411	F029983	N/A	VGKLVSLCYIIGYKWVTVMDGVKFEFNDIILSLYKKN

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