Basic Information | |
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Taxon OID | 3300010051 Open in IMG/M |
Scaffold ID | Ga0133939_1002979 Open in IMG/M |
Source Dataset Name | Industrial wastewater microbial communities from reactors of effluent treatment plant in South Killingholme, Immingham, England. Combined Assembly of Gp0151195, Gp0151196 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Aalborg University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 160319 |
Total Scaffold Genes | 164 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 107 (65.24%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Industrial Wastewater → Industrial Wastewater Microbial Communities From Reactors Of Effluent Treatment Plant In South Killingholme, Immingham, England |
Source Dataset Sampling Location | ||||||||
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Location Name | South Killingholme, Immingham, South Humberside, DN40 3DW, England | |||||||
Coordinates | Lat. (o) | 53.633367 | Long. (o) | -0.251861 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F073721 | Metagenome | 120 | Y |
F098098 | Metagenome / Metatranscriptome | 104 | N |
Protein ID | Family | RBS | Sequence |
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Ga0133939_1002979116 | F098098 | GAGG | MASNGLGILDELRRPYGREHWELVKAGREGSYWQAADGLIVRLAVAESVHQADNLGRLLLDLAVQYAAGK* |
Ga0133939_1002979147 | F073721 | GGAG | MIRALHAVCVLLAVMPPLARAVPPNPADNPHSFITVWEPRQPGYAASFFTEMTRTAGSAAPLADFTVAAQLVAKNGPGMHQWAFGAATEAWALPGSRSILVGLEAAVINEEPSNAYPKIANNAVMKNRADGAPDPGQPMNANSVAYWVTAQPGTGFERGLVFDAVSLRKSGGRAAAIDLSDIPDDEIGSIDLIRIRKNVTLRYDTASGQLVLHKD* |
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