Scaffold Ga0133744_10006

Overview

Basic Information

• Taxon OID: 3300009960
• Scaffold ID: Ga0133744_10006
• Source Dataset Name: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 13
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Autonomous University of Barcelona
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 42775
• Total Scaffold Genes: 55
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 47 (85.45%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain

Source Dataset Sampling Location

• Location Name: Alicante,Spain
• Coordinates
  • Lat. (^o): 38.3852246
  • Long. (^o): -0.5132249

Associated Families

Family	Category	Number of Sequences	3D Structure?
F049707	Metagenome	146	N
F095632	Metagenome	105	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0133744_1000627	F095632	N/A	MTMSFKETTGYKVVNFVASTTASITAGAVVGALCPPAGVALTVVYSLGSGVLGSYVGDKAGRQYAENFAETIDSIKTDSNN*
Ga0133744_100067	F049707	AGGAG	VVSEYKSPHNDGHDPYILIWEYGNDIRRAEFSERWAEYDEAGWTIWHFRLVDGGVMSFSSREWDQRDDVNHLTTIWMKPSLYDIERN*