3300009960: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 13

Overview

Basic Information

• IMG/M Taxon OID: 3300009960
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120337 | Gp0151217 | Ga0133744
• Sample Name: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 13
• Sequencing Status: Permanent Draft
• Sequencing Center: Autonomous University of Barcelona
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 6616586
• Sequencing Scaffolds: 4
• Novel Protein Genes: 10
• Associated Families: 9

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3
All Organisms → Viruses → Predicted Viral	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal secretion

Location Information

• Location: Alicante,Spain
• Coordinates
  • Lat. (^o): 38.3852246
  • Long. (^o): -0.5132249
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F018385	Metagenome	235	Y
F027205	Metagenome	195	N
F036281	Metagenome	170	N
F043991	Metagenome	155	N
F049707	Metagenome	146	N
F051214	Metagenome	144	N
F067847	Metagenome	125	N
F074985	Metagenome	119	N
F095632	Metagenome	105	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133744_10005	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	43969
Ga0133744_10006	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	42775
Ga0133744_10021	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	17645
Ga0133744_11716	All Organisms → Viruses → Predicted Viral	1009

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133744_10005	Ga0133744_100058	F049707	VVSEYKSPHNDGHDPYILIWEYGNDIQRAEFVERWTDWDETGWTVWYFRLVGGGIMTFSTREWEQKDDVNHLTTIWMKPSLYDIERKTS*
Ga0133744_10006	Ga0133744_1000627	F095632	MTMSFKETTGYKVVNFVASTTASITAGAVVGALCPPAGVALTVVYSLGSGVLGSYVGDKAGRQYAENFAETIDSIKTDSNN*
Ga0133744_10006	Ga0133744_100067	F049707	VVSEYKSPHNDGHDPYILIWEYGNDIRRAEFSERWAEYDEAGWTIWHFRLVDGGVMSFSSREWDQRDDVNHLTTIWMKPSLYDIERN*
Ga0133744_10021	Ga0133744_1002110	F036281	MITLIKVDEGPVDIYELRMQYLAKLKQTDGVMLPTFIYRNKDLFVTEFKPTCDDQWIMYMTNAEGLITKMRIKNGDLMSNGSVLFLAEERKTYNAKEYYDYWSAREGRPAPFFYESRQYHVKSFMRVPGSTDLWITAERETGHWYTFRMSDAQKSKFTRHTMMNEKGHQSYDWVLENVEWAADTIRYF*
Ga0133744_10021	Ga0133744_1002111	F027205	VASRLIVSADDILKAVKESEEFERKALSEARKRDRAEGKEPRETLYPNPDLKPGREIVLDYIKNPERRRTPRCSVHLEKRTANNSYRFVVDVSQVRNRELADEIEKDLFAFMDYLLDEYDIPRRIKRSTK*
Ga0133744_10021	Ga0133744_1002114	F043991	MSKKNPSVIDYFDLNGDLNEEAYEFEDVKLEEYIDKRSNVKPSWVGKYSHQMQFDLPDDTEVSFYKGLNIVYADINFAGGIRTILFKCRQKKNLTRFISRVLEIAQGDPSNVHPDFRA*
Ga0133744_10021	Ga0133744_1002115	F051214	MPGKIVAHDTHLRIDTEFIELKDCFEAFRRGVEYREKNDVDDILVICNAPDIIEYQLKNGDSFIVTYDPIHRIIVMRVFLHDEDITIKPIYIYNNREYQIACEFLRQIMHDKIDLKGEWIA*
Ga0133744_10021	Ga0133744_1002119	F018385	MAEYVNQWESYKELSIENDRNPVLDDPVIYGNDVKHFTLTVYSPEGRVSKYWNTRILADDLGRCRIACPRDGKILCFAWFEWTSYMFSHDGLNELVFMPRTNSRLPSTLWNTKEVK*
Ga0133744_10021	Ga0133744_100219	F074985	MELTDGGWYKTPRIIKGTDFLAHIHDTYASGNAMYVEFKASEGEVRILEYKRLYEVDTESAVLFTINTYPQESILLKNIEEYEFIQYRPKQAWKAIHMGSTKRFNLEQFDQLWLDQTFQKLHPVIVNHDGKFWHVMGLKLDVDTDGSFWGLYLKRQDSDFMKEIRMPLTQKFIYNPISGSWSLDDSTQEIKDLEEIKQTLRADTILDVTVSGVPMKLIRVQEIAKGVLFFVFQDEEKNKRYYYNRPAAKLRIVTDSETGEQKYLLDHIKAMHID*
Ga0133744_11716	Ga0133744_117162	F067847	MFSHIVRVKGFFDDEPKAKKLYFHLSRREMFDFIKRYDNVTNFQEWMQSAIDAEDLYTLMEFFDDLIGTSYGERQGEHFIKTPQIKESFLNSPEYEKLFDLFMENPGLVKQFYEGILPEKLLKQVKEDGKFAEVEEKIKEAELNSL*