Basic Information | |
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Taxon OID | 3300009784 Open in IMG/M |
Scaffold ID | Ga0123357_10004507 Open in IMG/M |
Source Dataset Name | Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 16373 |
Total Scaffold Genes | 17 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 8 (47.06%) |
Novel Protein Genes | 4 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Associated Families | 3 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany |
Source Dataset Sampling Location | ||||||||
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Location Name | Petit - Saut dam, French Guiana | |||||||
Coordinates | Lat. (o) | 5.0626 | Long. (o) | -53.0462 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F010548 | Metagenome | 302 | Y |
F024817 | Metagenome | 204 | Y |
F104011 | Metagenome | 101 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0123357_1000450712 | F024817 | GAG | VGRLVCSNGGMILTGKSEVQGENHHRLWVVDGWMSMEQWWNDADRGN* |
Ga0123357_1000450716 | F104011 | N/A | MLINGVDMNIKLTLAPEAFYLFAPSDQSKLRIRILDASLFITQVELKPFFFLLTLMFWE* |
Ga0123357_100045074 | F010548 | GGA | MEAKHSTVWVVDGWISMKQWWNDTDRDKLKYWEKNIIKCGWYVDG* |
Ga0123357_100045076 | F010548 | GGA | MGENHYKAWVVDGWMSVGQWWKDTEWAKLKNWENKIIQRWS* |
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