Basic Information | |
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Taxon OID | 3300008886 Open in IMG/M |
Scaffold ID | Ga0115930_1111861 Open in IMG/M |
Source Dataset Name | Microbial communities associated with unicellular green alga Micrasterias crux-melitensis, Germany - (MZCH: 98) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | HPI Heinrich-Pette-Institut |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 528 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Microbial → Bacteria → Unclassified → Unclassified → Micrasterias Crux-Melitensis (Mzch 98) Associated → Microbial Communities Associated With Unicellular Green Alga Micrasterias Crux-Melitensis, Germany - (Mzch: 98) |
Source Dataset Sampling Location | ||||||||
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Location Name | Germany | |||||||
Coordinates | Lat. (o) | 53.560155 | Long. (o) | 9.859606 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F062644 | Metagenome / Metatranscriptome | 130 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0115930_11118611 | F062644 | N/A | LGDKVLIFRFRLSTPPSRRLSVTAESLDPLNSADTCPAPEDVAGEDLARVKSISHCPAPEGVAGDDPAQVGSANYDPAPEGVRAGSPSCTSMDVHAGSPPHSGCMVVAQALDQGVALEGSVPADRVLGSVDGTELIPAGSLQAASGGGLTPGYQLISPDLGIPSFFSNLQVL* |
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