Basic Information | |
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Taxon OID | 3300008784 Open in IMG/M |
Scaffold ID | Ga0103637_1000218 Open in IMG/M |
Source Dataset Name | Microbial communities from wetland soil in Czech Republic - M1_cDNA |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | Friedrich Schiller University of Jena |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1703 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil → Microbial Communities From Wetland Soil In Czech Republic |
Source Dataset Sampling Location | ||||||||
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Location Name | Czech Republic | |||||||
Coordinates | Lat. (o) | 50.14667 | Long. (o) | 12.45083 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F092931 | Metagenome / Metatranscriptome | 107 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0103637_10002182 | F092931 | AGGAG | MPSSAEEKREIGSALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAAVLVLAGLALNIAGARVRTRNR* |
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