Metagenome / Metatranscriptome Family F092931

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092931
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	69 residues
Representative Sequence	MPSSEEKREIGSALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAGVLVLLGLVLNVIGARVRAKNR
Number of Associated Samples	65
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.31 %
% of genes near scaffold ends (potentially truncated)	22.43 %
% of genes from short scaffolds (< 2000 bps)	73.83 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.112 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (29.907 % of family members)
Environment Ontology (ENVO)	Unclassified (27.103 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.159 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.86% β-sheet: 0.00% Coil/Unstructured: 38.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.63.1.1: Claudin	d3jbre_	3jbr	0.85417
f.13.1.0: automated matches	d7crja_	7crj	0.82306
c.49.2.0: automated matches	d6rdps_	6rdp	0.81754
e.8.1.1: DNA polymerase I	d3ncia2	3nci	0.81264
a.25.3.0: automated matches	d2vs0a_	2vs0	0.8045

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01012	ETF	45.79
PF06157	DUF973	3.74
PF00890	FAD_binding_2	1.87
PF07589	PEP-CTERM	1.87
PF13450	NAD_binding_8	1.87
PF12833	HTH_18	0.93
PF03972	MmgE_PrpD	0.93
PF08359	TetR_C_4	0.93
PF08681	DUF1778	0.93
PF02445	NadA	0.93
PF02265	S1-P1_nuclease	0.93
PF09699	Paired_CXXCH_1	0.93
PF11453	DUF2950	0.93
PF13419	HAD_2	0.93
PF07992	Pyr_redox_2	0.93
PF04055	Radical_SAM	0.93
PF05016	ParE_toxin	0.93
PF05532	CsbD	0.93
PF00106	adh_short	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	45.79
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	45.79
COG0379	Quinolinate synthase	Coenzyme transport and metabolism [H]	0.93
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.93
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.93
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.93
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.93

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.11 %
Unclassified	root	N/A	15.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.11 %
Unclassified	root	N/A	15.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.11 %
Unclassified	root	N/A	15.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.83 %
Unclassified	root	N/A	15.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	53.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.76 %
Unclassified	root	N/A	15.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	52.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Unclassified	root	N/A	15.89 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	52.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Unclassified	root	N/A	15.89 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	34.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Unclassified	root	N/A	15.89 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	5.61 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	18.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Unclassified	root	N/A	15.89 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	4.67 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.93 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	18.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Unclassified	root	N/A	15.89 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	4.67 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.93 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001385\|JGI20193J14888_1040058	Not Available	594	Open in IMG/M
3300003218\|JGI26339J46600_10006950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3313	Open in IMG/M
3300003218\|JGI26339J46600_10045919	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300003218\|JGI26339J46600_10167650	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300003219\|JGI26341J46601_10171269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300003219\|JGI26341J46601_10190780	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	559	Open in IMG/M
3300003223\|JGI26343J46809_1010529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300003368\|JGI26340J50214_10068838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300003369\|JGI24140J50213_10003433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6369	Open in IMG/M
3300004080\|Ga0062385_10532388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	731	Open in IMG/M
3300004080\|Ga0062385_10851275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	601	Open in IMG/M
3300004080\|Ga0062385_10993860	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	563	Open in IMG/M
3300004092\|Ga0062389_101701045	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	812	Open in IMG/M
3300004092\|Ga0062389_101953033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	764	Open in IMG/M
3300004092\|Ga0062389_102806459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300004092\|Ga0062389_104208531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	541	Open in IMG/M
3300004152\|Ga0062386_100260073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1377	Open in IMG/M
3300004152\|Ga0062386_100661345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300004152\|Ga0062386_100724364	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	817	Open in IMG/M
3300004152\|Ga0062386_101174610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	638	Open in IMG/M
3300004152\|Ga0062386_101371121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	589	Open in IMG/M
3300004152\|Ga0062386_101383775	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	586	Open in IMG/M
3300005938\|Ga0066795_10154657	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	684	Open in IMG/M
3300005938\|Ga0066795_10195871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	601	Open in IMG/M
3300006052\|Ga0075029_100136634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1498	Open in IMG/M
3300006055\|Ga0097691_1006655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6280	Open in IMG/M
3300006059\|Ga0075017_101594381	Not Available	515	Open in IMG/M
3300006642\|Ga0075521_10114194	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300006642\|Ga0075521_10584150	Not Available	549	Open in IMG/M
3300008784\|Ga0103637_1000218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1703	Open in IMG/M
3300010339\|Ga0074046_10042062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	3067	Open in IMG/M
3300010339\|Ga0074046_10047569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	2861	Open in IMG/M
3300010339\|Ga0074046_10121189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1679	Open in IMG/M
3300010339\|Ga0074046_10147875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1500	Open in IMG/M
3300010341\|Ga0074045_10153660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1562	Open in IMG/M
3300010341\|Ga0074045_10219801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1266	Open in IMG/M
3300010341\|Ga0074045_11061874	Not Available	506	Open in IMG/M
3300010343\|Ga0074044_10399200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300010379\|Ga0136449_100010267	All Organisms → cellular organisms → Bacteria	25960	Open in IMG/M
3300010379\|Ga0136449_104377460	Not Available	521	Open in IMG/M
3300014156\|Ga0181518_10234126	Not Available	940	Open in IMG/M
3300014164\|Ga0181532_10076918	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300014501\|Ga0182024_12228836	Not Available	599	Open in IMG/M
3300016319\|Ga0182033_10510982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1034	Open in IMG/M
3300016702\|Ga0181511_1365464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4855	Open in IMG/M
3300016750\|Ga0181505_10929654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	767	Open in IMG/M
3300017928\|Ga0187806_1372278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300017932\|Ga0187814_10119425	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	977	Open in IMG/M
3300017935\|Ga0187848_10005432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8457	Open in IMG/M
3300017943\|Ga0187819_10423631	Not Available	763	Open in IMG/M
3300017943\|Ga0187819_10634823	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300017970\|Ga0187783_10025520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4377	Open in IMG/M
3300017973\|Ga0187780_11489777	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300018003\|Ga0187876_1000031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	126983	Open in IMG/M
3300018060\|Ga0187765_11085037	Not Available	554	Open in IMG/M
3300018086\|Ga0187769_10074167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2406	Open in IMG/M
3300019284\|Ga0187797_1260086	Not Available	977	Open in IMG/M
3300021433\|Ga0210391_10473800	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300022524\|Ga0224534_1048394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300025457\|Ga0208850_1018781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1245	Open in IMG/M
3300025481\|Ga0208079_1001705	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11279	Open in IMG/M
3300025527\|Ga0208714_1000433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12010	Open in IMG/M
3300025604\|Ga0207930_1005947	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3788	Open in IMG/M
3300025650\|Ga0209385_1035059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1924	Open in IMG/M
3300025650\|Ga0209385_1170368	Not Available	629	Open in IMG/M
3300026271\|Ga0209880_1050862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	908	Open in IMG/M
3300027698\|Ga0209446_1000352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10345	Open in IMG/M
3300027698\|Ga0209446_1001735	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5227	Open in IMG/M
3300027698\|Ga0209446_1027662	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300027703\|Ga0207862_1051512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1241	Open in IMG/M
3300027783\|Ga0209448_10263990	Not Available	567	Open in IMG/M
3300027812\|Ga0209656_10002084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13061	Open in IMG/M
3300027812\|Ga0209656_10007820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6846	Open in IMG/M
3300027812\|Ga0209656_10065484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1996	Open in IMG/M
3300027812\|Ga0209656_10074087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1848	Open in IMG/M
3300027812\|Ga0209656_10101084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1514	Open in IMG/M
3300027812\|Ga0209656_10143110	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1206	Open in IMG/M
3300027824\|Ga0209040_10000517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	29678	Open in IMG/M
3300027824\|Ga0209040_10049155	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300028800\|Ga0265338_10574312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300029817\|Ga0247275_1083994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300031708\|Ga0310686_118554768	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	925	Open in IMG/M
3300031910\|Ga0306923_11191743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300031910\|Ga0306923_11603732	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300031912\|Ga0306921_10491909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1427	Open in IMG/M
3300032160\|Ga0311301_10600292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1587	Open in IMG/M
3300032160\|Ga0311301_12892882	Not Available	521	Open in IMG/M
3300032770\|Ga0335085_10052777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5483	Open in IMG/M
3300032770\|Ga0335085_10112700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3487	Open in IMG/M
3300032770\|Ga0335085_10506228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1377	Open in IMG/M
3300032782\|Ga0335082_10001610	All Organisms → cellular organisms → Bacteria	24094	Open in IMG/M
3300032783\|Ga0335079_10132429	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300032783\|Ga0335079_10451528	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300032783\|Ga0335079_10555342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1217	Open in IMG/M
3300032783\|Ga0335079_10741930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1022	Open in IMG/M
3300032828\|Ga0335080_10175352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2366	Open in IMG/M
3300032892\|Ga0335081_10065703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5588	Open in IMG/M
3300032892\|Ga0335081_11588374	Not Available	719	Open in IMG/M
3300032892\|Ga0335081_11714894	Not Available	684	Open in IMG/M
3300032892\|Ga0335081_12477386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300032893\|Ga0335069_10087605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3962	Open in IMG/M
3300032954\|Ga0335083_10777671	Not Available	770	Open in IMG/M
3300032954\|Ga0335083_11017884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300032955\|Ga0335076_10752131	Not Available	856	Open in IMG/M
3300033004\|Ga0335084_11300722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300033158\|Ga0335077_10687625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1055	Open in IMG/M
3300034125\|Ga0370484_0017732	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1604	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.94%
Aquatic	Environmental → Aquatic	41.12%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.01%
Freshwater	Environmental → Aquatic → Freshwater	39.25%
Sediment	Environmental → Aquatic → Sediment	1.87%
Peat	Environmental → Terrestrial → Peat	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	39.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	35.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Loam	Environmental → Terrestrial → Soil → Loam	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	35.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	31.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	10.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	29.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	10.28%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	7.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.74%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%
Wetland Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300008784	Microbial communities from wetland soil in Czech Republic - M1_cDNA	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20193J14888_10400582	3300001385	Arctic Peat Soil	AGKEATMPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAAVLVAVGLVLNIVGARIRSRNR*
JGI26339J46600_100069503	3300003218	Bog Forest Soil	MSSSEEKVEIGAALMVIGWVLVLFAFLVMFFQPAAVRLGESRFQIIAGVLVLLGLVLNIIGARVRAKNR*
JGI26339J46600_100459191	3300003218	Bog Forest Soil	RRGGLESAMRSSEEKREIGSALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAAVLVLIGLVLNVMGARVRAKNR*
JGI26339J46600_101676501	3300003218	Bog Forest Soil	ARRGGLESAMRSSEEKREIGSALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAAVLVLIGLVLNVIGARVRAKNR*
JGI26341J46601_101712692	3300003219	Bog Forest Soil	MRSPEEKRETGTALMIIGWVMVLFAFLVMFYQPAAVRLGESRFQIIAGALILIGLVLNVIGARVRAQNR*
JGI26341J46601_101907801	3300003219	Bog Forest Soil	MPSSEEKREIGSALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAGVLVLLGLVLNVIGARVRAKNR*
JGI26343J46809_10105291	3300003223	Bog Forest Soil	MPSEEKVEIGAALMVIGWVLVLFAFLVMFFQPAAAKLGETRFQVIAGALVLLGLVLNIIGARVRAKNR*
JGI26340J50214_100688381	3300003368	Bog Forest Soil	MASSEEKVEIGAALMVIGWVLVLFAFLVMFFQPAGAKLGETRFQIIAGALVLLGLVLNIIGARVRRTNR*
JGI24140J50213_100034332	3300003369	Arctic Peat Soil	MPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAAVLVAVGLLLNIVGARIRSRNR*
Ga0062385_105323881	3300004080	Bog Forest Soil	MSTSEEKREIGSALMVIGWVMVLFAFLVMLYHPAAVKLGETRFEIIAAALVLIGLVLNVIGVRVRGQNH*
Ga0062385_108512752	3300004080	Bog Forest Soil	MPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALVLIGLVLNVIGARIRAQNR*
Ga0062385_109938601	3300004080	Bog Forest Soil	MSTSEEKREIGSALMVVGWVVILFAFLVMFYHPAAVKLGETRFEIIAAALVIIGLVLNVIGVRVRAQ
Ga0062389_1017010452	3300004092	Bog Forest Soil	LSVGVLESAMPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALVLIGLVLNVIGARIRAQNR*
Ga0062389_1019530332	3300004092	Bog Forest Soil	MPSSEEKREIGSALMVIGWVMVLFAFLVMFYQPAAAKLGESRFQIIAAVLLLIGLVLNVIGARVRAQNR*
Ga0062389_1028064592	3300004092	Bog Forest Soil	MPSEEKRETGAALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAGALVVTGLVLNIVGARMRANNR*
Ga0062389_1042085311	3300004092	Bog Forest Soil	MPTPEEKREMGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALVIIGLVLNVIGARIRAQNR*
Ga0062386_1002600731	3300004152	Bog Forest Soil	MSSSEEKREIGSALMVVGWVVILFAFLVMFYHPAAVKLGETRFEIIAAALVIIGLVLNVIGVRVRAQNR*
Ga0062386_1006613451	3300004152	Bog Forest Soil	MPSSEEKRETGTALMSIGWIMVLFAFLVMFYQPAAIKLGETRFAVIAGVLVIAGLFLNVIGARMRARNR*
Ga0062386_1007243641	3300004152	Bog Forest Soil	HVGVLESAMPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAAALVLIGLVLNVIGARIRAQNR*
Ga0062386_1011746101	3300004152	Bog Forest Soil	MASSEEKVEIGAALMVIGWVMVLFAFLVMFFQPAGARLGETRFQIIAGTMVLLGLVLNIIGARVKRKNR*
Ga0062386_1013711211	3300004152	Bog Forest Soil	MPASEEKREIGSALMVIGWVLVLFAFLVMFYQPAAVKLGESRFQIIAAALVLIGIVLNVIGARVRAKNR*
Ga0062386_1013837752	3300004152	Bog Forest Soil	MPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMRLGESRFQIIAGALVLIGLVLNVIGARIRAANR*
Ga0066795_101546571	3300005938	Soil	MPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAGVLVAVGLLLNIIGARIRRRNR*
Ga0066795_101958712	3300005938	Soil	MPSSEEKRETGSAFVIIGWVLVLFAFLVMFFQPAARKLGKTRFEIIAGVLVAVGLLLNIVGARIRRRNR*
Ga0075029_1001366342	3300006052	Watersheds	MPSSSEEKREIGSALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAAVLVLAGLVLNIVGARVRTRNR*
Ga0097691_10066552	3300006055	Arctic Peat Soil	MPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAAVLVAVGLVLNIVGARIRSRNR*
Ga0075017_1015943812	3300006059	Watersheds	MASSEEKRETGSAMMIIGWVLVLFALLVLFFLPAALKLGETRFQIIAGVLIAVGLTLNVVGARIRRRNR*
Ga0075521_101141942	3300006642	Arctic Peat Soil	MPSSEDKRETGSAFVIIGWVLVLFAFLVMFFQPAARKLGETRFEIIAGVLVAVGLLLNIVGARIRRRNR*
Ga0075521_105841502	3300006642	Arctic Peat Soil	MPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAAVLVAVGLLLNIVGARMRSRNR*
Ga0103637_10002182	3300008784	Wetland Soil	MPSSAEEKREIGSALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAAVLVLAGLALNIAGARVRTRNR*
Ga0074046_100420623	3300010339	Bog Forest Soil	GTALMIIGWVMVLFAFLVMFYQPAAVRLGESRFQIIAGALILIGLVLNVIGARVRAQNR*
Ga0074046_100475692	3300010339	Bog Forest Soil	MRSSEEKREIGSALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAAVLVLIGLVLNVMGARVRAKNR*
Ga0074046_101211891	3300010339	Bog Forest Soil	AMRSPEEKRETGTALMIIGWVMVLFAFLVMFYQPAAVRLGESRFQIIAGALILIGLVLNVIGARVRAQNR*
Ga0074046_101478752	3300010339	Bog Forest Soil	MRSPEEKRETGTALMIIGWVMVLFAFLVMFYQPAAVRLGESRFQIIAGALILVGLVLNVIGARVRAQNR*
Ga0074045_101536602	3300010341	Bog Forest Soil	MPSSEEKRETGTALMSIGWIMVLFAFLVMFYQPAALKLGETRFAIIAAVLVCAGLFLNVIGARMRARNR*
Ga0074045_102198012	3300010341	Bog Forest Soil	MPSEEKRETGAALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAGALVVTGLVLNIVGARMRAKNR*
Ga0074045_110618742	3300010341	Bog Forest Soil	MPSSEEKRETGTALMSIGWIMVLFAFLVMFYQPAAVKLGETRFVVIAGVLVCAGLLLNVIGARMRAQNR*
Ga0074044_103992001	3300010343	Bog Forest Soil	MPSEEKRETGAALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQVIAGALVLIGLILNVIGARVRARNR*
Ga0136449_1000102674	3300010379	Peatlands Soil	MPSSEEKRETGSAFVIIGWVLVLFAFLVMFFQPAARKLGETRFEIIAGVLVAVGLLLNIVGARIRRRNR*
Ga0136449_1043774602	3300010379	Peatlands Soil	MRSPEEKRETGTALMIIGWIMVLFAFLVMFYQPAAVRLGESRFQIIAAVLILIGLVLNVIGARVRAQNR*
Ga0181518_102341262	3300014156	Bog	MRSSEEKRETGTALMIIGWVMVLFAFLVMFYQPAAVRLGESRFQIIAAALILIGLVLNVIGARIRAQNR*
Ga0181532_100769183	3300014164	Bog	MPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALVIIGLVMNVIGARIRAQDR*
Ga0182024_122288362	3300014501	Permafrost	MPSSEEKRETGSAYMIIGWVLVLFAFLVMFFQPAARKLGETRFEIIAGVLVAAGLLLNIVGARIRRRNR*
Ga0182033_105109822	3300016319	Soil	MSSSEEKVEVGAALMVIGWVMVLFAFLVMFFQPAGARLGESRFQIIAGALVLLGLVLNIIGARVRRKNR
Ga0181511_13654643	3300016702	Peatland	MRSSEEKRETGTALMIIGWVMVLFAFLVMFYQPAAVRLGESRFQIIAAALILIGLVLNVIGARIRAQNR
Ga0181505_109296542	3300016750	Peatland	MPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALVIIGLVMNVIGARIRAQDR
Ga0187806_13722781	3300017928	Freshwater Sediment	QAFGTARNKSDCWSRAMATPEEKREIGAAIMVIGWIMVLFAFLVMFYQPAAMKLGESRFQVIAAALVLIGLVLNVIGARVRAQNR
Ga0187814_101194252	3300017932	Freshwater Sediment	MATPEEKREIGAAIMVIGWIMVLFAFLVMFYQPAAMKLGESRFQIIAAALVLIGLVLNVIGARVRAHNR
Ga0187848_100054329	3300017935	Peatland	MPSSEDKRETGSAFVIIGWVLVLFAFLVMFFQPAARKLGETRFEIIAGVLVAVGLVLNIVGARIRRRNR
Ga0187819_104236313	3300017943	Freshwater Sediment	MATPEEKREIGAAIMVIGWIMVLFAFLVMFYQPAAMKLGESRFQVIAAALVLIGLVLNVIGARVRAQNR
Ga0187819_106348232	3300017943	Freshwater Sediment	ESAMPPSEEKVEIGAALMVIGWVMVLFAFLVMFFQPAAVRLGESRFQIIAGALVLLGLVLNIIGARVRAKNR
Ga0187783_100255203	3300017970	Tropical Peatland	VLGSAMPTPEEKREIGAAIMVIGWVMVLFAFLVMFYQPAAMKLGETRFQIIAGMLVLIGLVLNVIGARMRAANR
Ga0187780_114897772	3300017973	Tropical Peatland	MPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALILIGLVLNVIGARIRAQNR
Ga0187876_1000031115	3300018003	Peatland	MPSSEEKRETGSAFVIIGWVLVLFAFLVMFFQPAARKLGETRFEIIAGVLVAVGLLLNIVGARIRRRNR
Ga0187765_110850371	3300018060	Tropical Peatland	MPTPEEKREIGAAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAAILVVLGVVLNVMGARVRAKNR
Ga0187769_100741673	3300018086	Tropical Peatland	MPTSEERREIGSALMVIGWVVVLFAFLVMFYHPAAAKLGEARFEIIAAALVLIGLVLNVIGARVRARNR
Ga0187797_12600861	3300019284	Peatland	MPTSEERREIGSALMVIGWVVVLFAFLVMFYHPAAAKLGEARFEIIAAALVLIGLVLNVIGARIRAQNR
Ga0210391_104738001	3300021433	Soil	KSACPLRREEAIMPSSEEKHETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFQIIAGVLVAAGLLLNISGARIRRRNR
Ga0224534_10483942	3300022524	Soil	MPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAALLVAGGLLLNIVGARIRSRNR
Ga0208850_10187812	3300025457	Arctic Peat Soil	MPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAAVLVAVGLLLN
Ga0208079_10017053	3300025481	Arctic Peat Soil	MPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAAVLVAVGLVLNIVGARIRSRNR
Ga0208714_10004334	3300025527	Arctic Peat Soil	MPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAAVLVAVGLLLNIVGARIRSRNR
Ga0207930_10059474	3300025604	Arctic Peat Soil	RRAGCGGQEAAMPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAAVLVAVGLLLNIVGARIRSRNR
Ga0209385_10350593	3300025650	Arctic Peat Soil	MPSSEDKRETGSAFVIIGWVLVLFAFLVMFFQPAARKLGETRFEIIAGVLVAVGLLLNIVGARIRRRNR
Ga0209385_11703682	3300025650	Arctic Peat Soil	MPSSEEKRETGSALMIIGWVLVLFAFLVMFFQPAAFKLGETRFEIIAAVLVAVGLLLNIVGARMRSRNR
Ga0209880_10508622	3300026271	Soil	MPSSEEKRETGSAFVIIGWVLVLFAFLVMFFQPAARKLGKTRFEIIAGVLVAVGLLLNIVGARIRRRNR
Ga0209446_10003521	3300027698	Bog Forest Soil	MPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALVLIGLVLNVIGARIRAQNR
Ga0209446_10017352	3300027698	Bog Forest Soil	MPSEEKVEIGAALMVIGWVLVLFAFLVMFFQPAAAKLGETRFQVIAGALVLLGLVLNIIGARVRAKNR
Ga0209446_10276622	3300027698	Bog Forest Soil	MSTSEEKREIGSALMVIGWVMVLFAFLVMLYHPAAVKLGETRFEIIAAALVLIGLVLNVIGVRVRGQNH
Ga0207862_10515122	3300027703	Tropical Forest Soil	MASEERRETGAALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAGVLVLIGLVLNIVGARVRAKNR
Ga0209448_102639901	3300027783	Bog Forest Soil	MPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALVIIGLVLNVIGARIRAQNR
Ga0209656_1000208413	3300027812	Bog Forest Soil	MPTPEEKREMGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALVIIGLVLNVIGARIRAQNR
Ga0209656_100078203	3300027812	Bog Forest Soil	MASSEEKVEIGAALMVIGWVLVLFAFLVMFFQPAGAKLGETRFQIIAGALVLLGLVLNIIGARVRRTNR
Ga0209656_100654842	3300027812	Bog Forest Soil	MRSPEEKRETGTALMIIGWVMVLFAFLVMFYQPAAVRLGESRFQIIAGALILIGLVLNVIGARVRAQNR
Ga0209656_100740873	3300027812	Bog Forest Soil	ALMVIGWVLVLFAFLVMFFQPAAAKLGETRFQVIAGALVLLGLVLNIIGARVRAKNR
Ga0209656_101010842	3300027812	Bog Forest Soil	MPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALVIIGLVMNVIGARIRAQNR
Ga0209656_101431102	3300027812	Bog Forest Soil	MSSSEEKVEIGAALMVIGWVLVLFAFLVMFFQPAAVRLGESRFQIIAGVLVLLGLVLNIIGARVRAKNR
Ga0209040_100005171	3300027824	Bog Forest Soil	EIGAALMVIGWVLVLFAFLVMFFQPAGAKLGETRFQIIAGALVLLGLVLNIIGARVRRTN
Ga0209040_100491555	3300027824	Bog Forest Soil	MPSPEEKREIGSALMVIGWVLVLFAFLVMFFQPAAVKLGESRFQIIAAVLVLIGLVLNV
Ga0265338_105743122	3300028800	Rhizosphere	MPSSEEKRETGSAFVIIGWILVLFAFLVMFFQPAARKLGETRFEIIAGVLVAVGLVLNIVGARIRRRNR
Ga0247275_10839942	3300029817	Soil	RETGSAFVIIGWVLVLFAFLVMFFQPAARKLGETRFEIIAGVLVAVGLLLNIVGARIRRRNR
Ga0310686_1185547681	3300031708	Soil	DVRVASRRARSGGQEATMPSSEEKRETGSAYMIIGWVLVLFAFLVVFFQPAARKLGETRFEIIAGVLVAAGLLLNIVGARIRRRNR
Ga0306923_111917432	3300031910	Soil	VMASSEEKVEIGAALMVIGWVMVLFAFLVMFFQPAGSRLGESRFQIIAGALVLLGLVLNIIGARVRRKNR
Ga0306923_116037321	3300031910	Soil	MPWSEEKRETGSALMIIGWTLVLVALLAMFFQPAAFKLGESRVEIIAGVLIASGLALNIIGARMRSRNT
Ga0306921_104919093	3300031912	Soil	MASSEERVEVGAALMVIGWVMVLFAFLVMFFQPAGARLGESRFQIIAGALVLLGLVLNIIGARVRRKNR
Ga0311301_106002922	3300032160	Peatlands Soil	MSSSEEKREIGSALMVVGWVVILFAFLVMFYHPAAVKLGETRFEIIAAALVIIGLVLNVIGVRVRAQNR
Ga0311301_128928821	3300032160	Peatlands Soil	MRSPEEKRETGTALMIIGWIMVLFAFLVMFYQPAAVRLGESRFQIIAAVLILIGLVLNVIGARVRAQNR
Ga0335085_100527773	3300032770	Soil	MPSSEEKRETGSALMVIGWVLVLFAFLVMFFYPAGAKLGEARFQVIAAVLLVLGLLLNIIGARTKARNR
Ga0335085_101127004	3300032770	Soil	MPTSEEKREIGSALMVIGWVMVLFAFLVMFYHPAAIKLGESRFEAIAAALVVVGVILNVIGARLRAANR
Ga0335085_105062282	3300032770	Soil	MPTPEEKREIGSALMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAAILVLLGLVLNVIGARLRAKNS
Ga0335082_100016101	3300032782	Soil	MATPEEKREIGAALMVIGWVMVLFAFLVMFYQPAAMKLGESRFQVIAAVLVLVGLVLNVIGARVRAQNR
Ga0335079_101324292	3300032783	Soil	MATPEEKREVGAAIMVIGWVMVLFAFLVMFYQPAGMKLGETRFQIIASVLVLLGLVLNVIGVRIRAQNR
Ga0335079_104515281	3300032783	Soil	VCEQKRVRALVLEWAMSTPEEKREIGAAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAAALVLVGFVLNVIGARVRAQNR
Ga0335079_105553422	3300032783	Soil	MPTPEEKREIGAAIMVIGWIMVLFAFLVMFYQPAAMKLGESRFQVIAAVLVLVGLVLNVIGARVRAQNR
Ga0335079_107419302	3300032783	Soil	MPSMEEKREGGSAVMIIGWVLMLFAFLVMFFNPAARKLGESRFQVVAGCLAAAGLIMSITGTVIRRRSR
Ga0335080_101753522	3300032828	Soil	MSTPEEKREIGAAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAAALVLVGFVLNVIGARVRAQNR
Ga0335081_100657032	3300032892	Soil	MSSMEDRREGGSAVMIIGWVLMLFAFLVMFFNPAARKLGESRFEVVAACLAVAGLLMSITGMRVRRRNR
Ga0335081_115883741	3300032892	Soil	MPTPEEKREIGAAIMVIGWIMVLFAFLVMFYQPAAMKLGESRFQVIAAVLVLVGLVLNVI
Ga0335081_117148942	3300032892	Soil	MPSMEEKREGGSAVMIIGWVLMLFAFLVMFFNPAARKLGESRFEVVAGCLAAAGLIMSITGTV
Ga0335081_124773862	3300032892	Soil	KRETGSALMVIGWVLVLFAFLVMFFYPAGAKLGEARFQVIAAVLLVLGLLLNIICARTKARNR
Ga0335069_100876055	3300032893	Soil	MPTPEEKREIGSAIMVIGWVMVLFAFLVMFYQPAAMKLGESRFQIIAGALILIGLVLNVIGARMRAQNR
Ga0335083_107776712	3300032954	Soil	MPWSEEKRETGSALMVIGWILVLFAFLAMFFQPAAFRLGETRFQIIAAVLIALGLLLNIIGARMRSRNT
Ga0335083_110178841	3300032954	Soil	DASGFRVFGKAAHTGVLESVMATPEEKREIGAALMVIGWVMVLFAFLVMFYQPAAMKLGESRFQVIAAVLVLVGLVLNVIGARVRAQNR
Ga0335076_107521312	3300032955	Soil	MPSMEEKREGGSAVMIIGWVLMLFAFLVMFFNPAARKLGESRFEVVAGCLAAAGLIMSITGTVIRRRSR
Ga0335084_113007221	3300033004	Soil	MPSSEEKRETGAALMVIGWVLVLFAFLVMFFYPAGVKLGEVRFQVIAGVLVLLGLLLNIIGARTRARNR
Ga0335077_106876252	3300033158	Soil	MPTPEEKREIGSALMVIGWVLVLFAFLVMFYQPAAMKLGESRFQIIAAVLIVLGVVLNVIGARVRAKNR
Ga0370484_0017732_741_950	3300034125	Untreated Peat Soil	MPSSEEKRETGSAFMIIGWVLVLFAFLVMFFQPAARKLGETRFEIIAGVLVAVGLLLNIVGARIRRRNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092931

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences