Basic Information | |
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Taxon OID | 3300007643 Open in IMG/M |
Scaffold ID | Ga0104854_10492196 Open in IMG/M |
Source Dataset Name | Biofilm microbial communities from a marine aquaculture plant in North Sea, Germany |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Max Planck Institute for Evolutionary Biology |
Sequencing Status | Finished |
Scaffold Components | |
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Scaffold Length (bps) | 15894 |
Total Scaffold Genes | 23 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 14 (60.87%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Biofilm Marine Aquaculture Plant → Biofilm Microbial Communities From A Marine Aquaculture Plant In North Sea, Germany |
Source Dataset Sampling Location | ||||||||
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Location Name | Northern Germany | |||||||
Coordinates | Lat. (o) | 54.13 | Long. (o) | 8.8 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F001823 | Metagenome / Metatranscriptome | 630 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0104854_1049219623 | F001823 | N/A | AFDRDLICGEHYGQRPVQAPHQQAEHMAAPTSSVLTIKKTLANTEPSTHGT* |
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