Basic Information | |
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Taxon OID | 3300005470 Open in IMG/M |
Scaffold ID | Ga0074646_100191 Open in IMG/M |
Source Dataset Name | Saline benthic water microbial community from Etoliko Lagoon, Greece |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Draft |
Scaffold Components | |
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Scaffold Length (bps) | 33020 |
Total Scaffold Genes | 45 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 8 (17.78%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment → Saline Water And Sediment Microbial Community From Etoliko Lagoon, Greece |
Source Dataset Sampling Location | ||||||||
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Location Name | Etoliko Lagoon, Greece | |||||||
Coordinates | Lat. (o) | 38.468307 | Long. (o) | 21.333032 | Alt. (m) | Depth (m) | 25 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F044785 | Metagenome | 154 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0074646_10019123 | F044785 | N/A | MLKKEAKWQTIFNQYVKEKRLYGFFELKQTDKETFPFSKIEKVQWEGLQATEKSGIVWKLSDEISRPKPCDSFSIPPLPSYLIIKFKKEFCLIRFEEIVKLRDKGVISISRSTAEKLSEKIIKI* |
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