Scaffold Ga0068519_1004523

Overview

Basic Information

• Taxon OID: 3300005039
• Scaffold ID: Ga0068519_1004523
• Source Dataset Name: Wastewater microbial communities from Nanji, Korea with extracellular vesicles - Nanji-3um
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2340
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 6 (85.71%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles

Source Dataset Sampling Location

• Location Name: Nanji, South Korea
• Coordinates
  • Lat. (^o): 37.3132
  • Long. (^o): 126.828

Associated Families

Family	Category	Number of Sequences	3D Structure?
F055725	Metagenome / Metatranscriptome	138	Y
F058997	Metagenome / Metatranscriptome	134	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0068519_10045234	F058997	GAGG	MIIYKGREMTVREACKLMGIDCDDFMAWCKKFALQNYGYAMNYYKRTLKFKKG*
Ga0068519_10045235	F055725	GAGG	MAFFKGCNIDTVKIAELAAQGLSLNSMSKVTGHSKNGIKAALERNSIQYTMGVKERFITVDGVLTSLGDACNAQGFSRKAMYAWRVKRGLNEQDGFDAYVIYQQSKRSIDKPILKFKNATVIYKKERYTLTEISDKLKLNRQRFEVFMRQNRYAQNAFERYCYTRGL*