Scaffold Ga0070914_101241

Overview

Basic Information

• Taxon OID: 3300004819
• Scaffold ID: Ga0070914_101241
• Source Dataset Name: Hypersaline lake viral communities from Bras del Port, Santa Pola, Alicante, Spain - HQ1 dirigido Enero 2015
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Alicante
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 748
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → environmental samples → uncultured virus (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Lake → Hypersaline Lake Viral Communities From Bras Del Port, Santa Pola, Alicante, Spain

Source Dataset Sampling Location

• Location Name: Santa Pola Alicante
• Coordinates
  • Lat. (^o): 38.19317
  • Long. (^o): -0.59268
  • Depth (m): 56.6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F088354	Metagenome	109	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0070914_1012412	F088354	AGGAGG	MTDMPRAQLDVDRFETAVVNSNGQIYLGRDLEGVKVHVAIEIVEDADEN*