3300004819: Hypersaline lake viral communities from Bras del Port, Santa Pola, Alicante, Spain - HQ1 dirigido Enero 2015

Overview

Basic Information

• IMG/M Taxon OID: 3300004819
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0114557 | Gp0113149 | Ga0070914
• Sample Name: Hypersaline lake viral communities from Bras del Port, Santa Pola, Alicante, Spain - HQ1 dirigido Enero 2015
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Alicante
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 7447736
• Sequencing Scaffolds: 14
• Novel Protein Genes: 15
• Associated Families: 6

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	4
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1
All Organisms → Viruses → environmental samples → uncultured virus	7
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Haloferuviridae → unclassified Haloferuviridae → environmental Halophage eHP-42	1
All Organisms → Viruses	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hypersaline Lake Viral Communities From Bras Del Port, Santa Pola, Alicante, Spain
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Lake → Hypersaline Lake Viral Communities From Bras Del Port, Santa Pola, Alicante, Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → hypersaline lake → lake water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: Santa Pola Alicante
• Coordinates
  • Lat. (^o): 38.19317
  • Long. (^o): -0.59268
  • Alt. (m): N/A
  • Depth (m): 56.6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F054456	Metagenome	140	N
F062297	Metagenome	131	N
F066493	Metagenome	126	Y
F072017	Metagenome	121	Y
F076468	Metagenome	118	N
F088354	Metagenome	109	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0070914_100020	Not Available	6992
Ga0070914_100050	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	4311
Ga0070914_100385	All Organisms → Viruses → environmental samples → uncultured virus	1377
Ga0070914_100543	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Haloferuviridae → unclassified Haloferuviridae → environmental Halophage eHP-42	1166
Ga0070914_100828	Not Available	925
Ga0070914_100833	All Organisms → Viruses → environmental samples → uncultured virus	922
Ga0070914_100853	All Organisms → Viruses → environmental samples → uncultured virus	912
Ga0070914_100877	All Organisms → Viruses → environmental samples → uncultured virus	894
Ga0070914_100949	All Organisms → Viruses	858
Ga0070914_101104	All Organisms → Viruses → environmental samples → uncultured virus	795
Ga0070914_101241	All Organisms → Viruses → environmental samples → uncultured virus	748
Ga0070914_101926	Not Available	576
Ga0070914_101978	Not Available	568
Ga0070914_102125	All Organisms → Viruses → environmental samples → uncultured virus	545

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0070914_100020	Ga0070914_1000202	F066493	MSEREWHDGVVDVADELVQEHSAEGAIERLQSRRQTSSDELQHRCTEAIAYIRREVQADA
Ga0070914_100050	Ga0070914_1000502	F072017	MSKTTTSSLDTHSDTDIKSIVHQHDEIHQLTQEHIDVLDEDDRLLDFYEWQQIIRASETTVRRLAYDEAGVEQ*
Ga0070914_100385	Ga0070914_1003852	F072017	MSLNQTPSLKPQSDTNVKSTVHKHDAIHRLTQEHIDVFTADDRLLDFYEWQQVIRSSETTVRRLAYDEVQQ*
Ga0070914_100543	Ga0070914_1005431	F054456	MAYNPNLDFSTDTEQLSPQQAHDRWEDVTNLDTPELERLEDSRRNELYLDAAEGNQGDDNPPIPGGPLDDAQHLASTPRDEWGPDERAEAEEALNFLSRTMPQFEQSEGEALIEDEPPKIHKDELSIMRWGVDPKPEDDFI*
Ga0070914_100828	Ga0070914_1008282	F054456	MYEPTLDFSTDTEQLSPAQAHDRWEDVTNLDTPELQRLEDSRRNELYLDAAEGNQGDDNPPIPGGPLADAQHLASTPRDEWGPDERAEAEEALNFLSRTLPQFEQSEGEPLIEGEPPKIHKDELSIMRWGVDPAPEDDFL*
Ga0070914_100833	Ga0070914_1008333	F062297	MSMDDLELPPRRYVVLAERVEDGRVVEQAVTGQSRAEELFERWDEGDQLCNLRVKAISAPMDDVTRHFEHDWPPTNNSPVSSDGATKGWETR*
Ga0070914_100853	Ga0070914_1008532	F072017	MSLNQTPSLEPQSDTNIKSTVHKHDAIHRLTQEHIDVLDGDDRLLDFYEWQQIIRASETTVRRLAHAEIEIEEGVDQ*
Ga0070914_100877	Ga0070914_1008771	F072017	MSKTTTSSLKTQSDTNIKSTVHKHDEIHAVTQEQIDVFDEDDRLLDFYQWQQIIRASETTVRRLAYDEVQQ*
Ga0070914_100949	Ga0070914_1009491	F088354	MTDTPRAELDVDRFETTTVNANGQVYLGRDLEGVKVHVAIEIVTDDDEQEDPE*
Ga0070914_101104	Ga0070914_1011043	F088354	MTDTPRAELDVDRFETTTVNANGQVYLGRDLEGVKVHVAVEIVDEQPD*
Ga0070914_101109	Ga0070914_1011092	F076468	MTKLEEIDTKAVWLSGRYWRREHKVVHIDGDCDQLDACDNPRGPVDPDVLAGDMSVCKRCDPNEPDRYGGTTGTSLAHRL
Ga0070914_101241	Ga0070914_1012412	F088354	MTDMPRAQLDVDRFETAVVNSNGQIYLGRDLEGVKVHVAIEIVEDADEN*
Ga0070914_101926	Ga0070914_1019261	F054456	MAYNPNLDFETDTEQLSPAQAHDRWEDVTNLDTPELERLEDSRRNELYLDAAAGNQGDDNPPIPGGPLDDAQHLASTPRDEWGPDERAEAEEAINFLSRTLPQFEQSEGEPLIEDESPKIHKDELSIMRWGVDPAPEDDFL*
Ga0070914_101978	Ga0070914_1019781	F054456	MYEPTLDFETDTEQLSPQQAHDRWEDVTNLDTPELERLEDSRRNELYLDAAAGNQGDDNPPIPGGPLDDAQHLASTPRDEWGPDERAEAEEALNFLSRTLPQFEQSEGEPLIEDESPKIHKDELSIMRWGVDPNPEDDFL*
Ga0070914_102125	Ga0070914_1021252	F088354	MTDTPRAELDVDRFETTTVNANGQIYLGRDLEGAKVHAAIEIVTDADEN*