Scaffold Ga0064346_10009886

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0064346_10009886

Scaffold Ga0064346_10009886

Overview

Basic Information
Taxon OID	3300003977 Open in IMG/M
Scaffold ID	Ga0064346_10009886 Open in IMG/M
Source Dataset Name	DCM
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	454 Life Sciences
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	537
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (100.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Marine → Coastal → Unclassified → Marine → Deep Chlorophyll Maximum

Source Dataset Sampling Location
Location Name	spain
Coordinates	Lat. (^o)	38.06851	Long. (^o)	-0.23199	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F026121	Metagenome / Metatranscriptome	199	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0064346_100098862	F026121	AGGAG	MMTTEEMLKKEAMRLRMEKLRAKRKPPKLVNVHHTVKALSDDNELSYTNVKKWIKTQEGI

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