Scaffold BeaverFeces_1009059

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold BeaverFeces_1009059

Scaffold BeaverFeces_1009059

Overview

Basic Information
Taxon OID	3300003472 Open in IMG/M
Scaffold ID	BeaverFeces_1009059 Open in IMG/M
Source Dataset Name	Beaver gut microbial communities from British Columbia, Canada - Beaver Fecal Sample 1
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Genome Quebec
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	3865
Total Scaffold Genes	8 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Hespellia → Hespellia stercorisuis	(Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Beaver Gut → Beaver Gut Microbial Communities From British Columbia, Canada

Source Dataset Sampling Location
Location Name	Canada: Langley Township, British Columbia
Coordinates	Lat. (^o)	49.01063	Long. (^o)	-122.625468	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F059106	Metagenome	134	N

Sequences

Protein ID	Family	RBS	Sequence
BeaverFeces_10090593	F059106	AGG	MHVIVWKIRVILLQIFAWIVDLKAREHLTGYLRKDTKYRRVTTGTHM*

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