Scaffold soap12_1042940

Overview

Basic Information

• Taxon OID: 3300002977
• Scaffold ID: soap12_1042940
• Source Dataset Name: Biogas reactor microbial communities from Swedish University of Agricultural Sciences, Alnarp, Sweden
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2619
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Biotransformation → Unclassified → Unclassified → Unclassified → Biogas Reactor → Biogas Reactor Microbial Communities From Swedish University Of Agricultural Sciences, Alnarp, Sweden, And As, Norway That Are Enriched On Cellulose

Source Dataset Sampling Location

• Location Name: SLU, Alnarp, Sweden
• Coordinates
  • Lat. (^o): 55.656904
  • Long. (^o): 13.082968

Associated Families

Family	Category	Number of Sequences	3D Structure?
F077200	Metagenome / Metatranscriptome	117	N

Sequences

Protein ID	Family	RBS	Sequence
soap12_10429401	F077200	N/A	YNMTPEEALERKRIGENYFPIRDQKIVAAGVINFFSKEEKIGIMAAVFAGEEKKILDNLAKRLDKIVKTTGKPFFVTGDGRKYALEILAGRAMSYMIEAKQKDQEVIPELQDMIKIITSPKNGYLKPFDTRDSIDIQAAFGLGHDIIPLPEKLQYTNEDLPELAENVKGILLDMMKNYACYAEVQGEKMKPVIYKLNEKVFKTTEIFKFEDHDESDIEKTLDKEELEIER*