Scaffold draft_11518683

Overview

Basic Information

• Taxon OID: 3300002856
• Scaffold ID: draft_11518683
• Source Dataset Name: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Tailing Pond Surface TP_surface
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5851
• Total Scaffold Genes: 22
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 18 (81.82%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Syncrude tailings pond, Wood Buffalo, Alberta, Canada
• Coordinates
  • Lat. (^o): 57.02
  • Long. (^o): -111.55

Associated Families

Family	Category	Number of Sequences	3D Structure?
F039532	Metagenome / Metatranscriptome	163	Y
F040583	Metagenome / Metatranscriptome	161	Y

Sequences

Protein ID	Family	RBS	Sequence
draft_1151868310	F040583	AGGA	MFIYLVTLTNGQTVRVETAGDPTEHPTFFGRVLDVQTIGEYGKHLSLV*
draft_1151868312	F040583	AGGA	MFVYLVKLTNGQTVRVETEGDPTEHPTFFGRVLDVQTIGESGKHLSLV*
draft_1151868319	F039532	N/A	MKDYLDYLPEDGIFSEEELWEAIAEAKGVDVSEIMDGDLVDYL*