Scaffold bg3kmer60_1075310

Overview

Basic Information

• Taxon OID: 3300002837
• Scaffold ID: bg3kmer60_1075310
• Source Dataset Name: Biogas reactor microbial communities from SLU, Sweden, that are enriched on cellulose - Sample No3 60kmer
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 692
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Biotransformation → Unclassified → Unclassified → Unclassified → Biogas Reactor → Biogas Reactor Microbial Communities From Swedish University Of Agricultural Sciences, Alnarp, Sweden, And As, Norway That Are Enriched On Cellulose

Source Dataset Sampling Location

• Location Name: Sweden: Sk?ne County
• Coordinates
  • Lat. (^o): 55.656904
  • Long. (^o): 13.082968

Associated Families

Family	Category	Number of Sequences	3D Structure?
F065813	Metagenome / Metatranscriptome	127	N
F073596	Metagenome / Metatranscriptome	120	N
F095525	Metagenome / Metatranscriptome	105	Y

Sequences

Protein ID	Family	RBS	Sequence
bg3kmer60_10753101	F065813	N/A	MIPLISFFGWFDIIIATPFVLYFGYKIIKWIIGKLKKQPQEGEIETPDVES*
bg3kmer60_10753102	F073596	N/A	MNVFEKIKLWFTSVSKIVKFLTDTFGEAKILKDKQANFKDWVEFIIAFIKDALQYADEIAALSQAQPVQTKGQVIKAVKQDKKISANYKTAYFKEKAQNFNK*
bg3kmer60_10753103	F095525	N/A	NVTAIWLVALGLVVGVVVGQLLQYNKHRIENFINKLKKKIK*