Scaffold codie8draft_1056663

Overview

Basic Information

• Taxon OID: 3300002733
• Scaffold ID: codie8draft_1056663
• Source Dataset Name: Coal-bed methane well microbial communities from Surat Basin, Queensland, Australia, Sample - Codie-8 produced water
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2596
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 6 (75.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Coal-Bed Methane Well → Coal-Bed Methane Well Microbial Communities From Surat Basin, Queensland, Australia

Source Dataset Sampling Location

• Location Name: Australia: Tara, Queensland
• Coordinates
  • Lat. (^o): -27.0061
  • Long. (^o): 150.3916

Associated Families

Family	Category	Number of Sequences	3D Structure?
F006300	Metagenome	376	Y
F020893	Metagenome	221	Y
F103228	Metagenome	101	N

Sequences

Protein ID	Family	RBS	Sequence
codie8draft_10566633	F020893	GGA	MPTEIYVALISALGIITAAGLPAYLIERSRKENATDHAKVTKVLRRVEHKIDQHLEDHGNGTTRRNSSEAKSNARH*
codie8draft_10566635	F006300	GGTGG	MKWQYVLEDWAKAFVAGSVAVLMTGEYDLTGALKAGLAATLPLIYAWANTKDPRYGRH*
codie8draft_10566638	F103228	N/A	LSTQTAGDTLAANLLAKYKDPVVRFNEMTVILNGLNDTDAQAVSTLDIGDLVEITKTYTTGSPTTVTKTMYVENIQHEITPGFHRIRLGLGQAQLLTPFILDTSKLDDVTVGLG*