Scaffold codie8draft_1014686

Overview

Basic Information

• Taxon OID: 3300002733
• Scaffold ID: codie8draft_1014686
• Source Dataset Name: Coal-bed methane well microbial communities from Surat Basin, Queensland, Australia, Sample - Codie-8 produced water
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1560
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (25.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Coal-Bed Methane Well → Coal-Bed Methane Well Microbial Communities From Surat Basin, Queensland, Australia

Source Dataset Sampling Location

• Location Name: Australia: Tara, Queensland
• Coordinates
  • Lat. (^o): -27.0061
  • Long. (^o): 150.3916

Associated Families

Family	Category	Number of Sequences	3D Structure?
F014256	Metagenome	264	Y
F039115	Metagenome	164	N

Sequences

Protein ID	Family	RBS	Sequence
codie8draft_10146862	F014256	AGG	MAHPAFMLVDGYKQLVTRLGLISGLNVTDDPRAIKLPCVLVEAPSIAMHTNVVAEMQFNVVVMVQGQGDNKSLMHLLELVDEIRNAQIGLVEARPTTRSYGGLDYPAYDLTISTKVAP*
codie8draft_10146863	F039115	N/A	GSSARHYVGGLTNLTVTATLLMEYSSTPGTYVDLTALVGTNVYCEVKVTSGTISATNPEFEITGAYFESLDVVNASLGELSEVEITLTGGTLVEDITPDT*