Scaffold M3t6FKB1

Basic Information
Taxon OID	3300002138 Open in IMG/M
Scaffold ID	M3t6FKB1_1396566 Open in IMG/M
Source Dataset Name	M3t6FKB1 (102f)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300002138 Open in IMG/M

Scaffold ID

M3t6FKB1_1396566 Open in IMG/M

Source Dataset Name

M3t6FKB1 (102f)

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	38629
Total Scaffold Genes	56 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	41 (73.21%)
Novel Protein Genes	6 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	4 (66.67%)
Associated Families	6

Scaffold Components

Scaffold Length (bps)

38629

Total Scaffold Genes

56 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

41 (73.21%)

Novel Protein Genes

6 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

4 (66.67%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Ecosystem

Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location
Location Name	Baltic Sea
Coordinates	Lat. (^o)	65.3915	Long. (^o)	23.49916667	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Baltic Sea

Coordinates

Lat. (^o)

65.3915

Long. (^o)

23.49916667

Alt. (m)

Depth (m)

Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000934	Metagenome / Metatranscriptome	828	Y
F001991	Metagenome / Metatranscriptome	607	Y
F002085	Metagenome / Metatranscriptome	595	Y
F012668	Metagenome / Metatranscriptome	278	Y
F027177	Metagenome	195	Y
F037639	Metagenome / Metatranscriptome	167	Y

Sequences

Protein ID	Family	RBS	Sequence
M3t6FKB1_139656617	F000934	GAG	MSLNQILAIAESVGINDQRFIGQVLSRNQRINTSEQLTVVPFAFTMKPMNYLRYSESRSLLSSLRVPDKALEQYLNFSTTGWSNYIEYQGDMTSGQISACAWQTSSANNNLVLGSLPSISSSAYIVKIGDFCQVGRYAYIATANVQRGGGSTVNIPVHRSLLTPLVSPVSAVIGEFGTTVSLGGSSYIGTTFCVILRSYPTYTLIPIQNDSFIQWSGDFVAFEAVL*
M3t6FKB1_139656618	F002085	AGGCGG	MNVIAPVDGTNNIRYADFVRVTTGDAVYRFATTPKALTIPAVDALPFDAVGQLMKVGSAQRDIKSTANETTFTLVGIDTAMLGWVLGQNVKGAKIEAWHGFFDTDEVLITDGGTGGLYQFFNGFINSFSINEEWMEELRTYVGIITVSASSIQLILQNRTAGRYTNDNSWQFFNNGDTSMNRVPFISTINYYFGKTQ*
M3t6FKB1_139656622	F001991	GGAG	MAIFSKNTLTQISGFDNPIIAGELVWEQQTYWNLTFKNASTGDAYDLTGATLDAQILRRNLSNIRDTRYGLTFDIADFDPEPDPVNLTITNVVEENGAFTLVINDADWEVLSSSVQLDINAENCVGFSGRIKISMPEQGTTPAQDLIIFLLFLMRSDGVTN*
M3t6FKB1_139656624	F037639	N/A	MLPRYQGIDTSFLVATLTAAIQEQQAIITALTTRITALEAK*
M3t6FKB1_139656631	F027177	GAGG	MKFLNWFKKLYIPATCEELMAQELDTARRDLLLAETARDYAESMVLYNNQRIERLTAALQERLA*
M3t6FKB1_13965669	F012668	N/A	MAITRYENVDINNVTNGVNSVGEYTTTITEWFTSRALVADVSNSLRISERYRVYQDLVNLTFNYTPNIKSIVDNQNLYSITWRGFDWRITDIRESNDRMKVTLLCYRNDPTTPV*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold M3t6FKB1_1396566

Overview

Ecosystem & Geography

Associated Families

Sequences