Scaffold CSTRM48_1002310

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold CSTRM48_1002310

Scaffold CSTRM48_1002310

Overview

Basic Information
Taxon OID	3300002130 Open in IMG/M
Scaffold ID	CSTRM48_1002310 Open in IMG/M
Source Dataset Name	Wastewater microbial communities from Belvaux, Luxembourg - M48
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1806
Total Scaffold Genes	5 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	5 (100.00%)
Novel Protein Genes	2 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	2 (100.00%)
Associated Families	2

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Belvaux, Luxembourg

Source Dataset Sampling Location
Location Name	Belvaux, Luxembourg
Coordinates	Lat. (^o)	49.506095	Long. (^o)	5.943536	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F021262	Metagenome / Metatranscriptome	219	N
F049316	Metagenome / Metatranscriptome	147	N

Sequences

Protein ID	Family	RBS	Sequence
CSTRM48_10023103	F021262	AGGAG	MSKKYYIKFTTGKELTGTAKEIVTQLRNESRLLAITPRKYARLVAKSYEMSTGLKLRTWTYNSFMKSLGKSLMVMEFKEMK*
CSTRM48_10023104	F049316	AGGAG	MDKDKRITTIVLDKEADRKSKIIAEFTGKTLSAIYREALDMYFSHFVNNDLLSEVNEYLDKLYWQYKIDNPHIFAAVQFGNLSNAAVMIAEAIKQLPQEPEAQKLIDEGMRLISILSK*

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