Scaffold CSTR_1030708

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold CSTR_1030708

Scaffold CSTR_1030708

Overview

Basic Information
Taxon OID	3300002079 Open in IMG/M
Scaffold ID	CSTR_1030708 Open in IMG/M
Source Dataset Name	CSTRmetagenomics
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1035
Total Scaffold Genes	3 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	3 (100.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater Treatment Plant → Wastewater Treatment Plant Microbial Communities From Luxembourg

Source Dataset Sampling Location
Location Name	Belvaux, Luxembourg
Coordinates	Lat. (^o)	49.507864	Long. (^o)	5.943557	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F049316	Metagenome / Metatranscriptome	147	N

Sequences

Protein ID	Family	RBS	Sequence
CSTR_10307081	F049316	AGGAG	MDKDKRITTIVLDKEADRKSKIIAEFTGKSLSAIYREALDMYFSHFVNNDLLSEVNEYLDKLYWQYKIDNPHIFAAVQFGNLSNAAVMIAEAIKQLPQEPEAQKLIDEGMRLISVLSK*

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