Scaffold Draft_10001866

Overview

Basic Information

• Taxon OID: 3300001580
• Scaffold ID: Draft_10001866
• Source Dataset Name: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Suncor taillings pond 6 2012TP6_6
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 21926
• Total Scaffold Genes: 47
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 38 (80.85%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (100.00%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Suncor Tailings Pond 6, Northern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.05
  • Long. (^o): -111.55
  • Depth (m): 6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F018683	Metagenome / Metatranscriptome	233	Y
F025021	Metagenome / Metatranscriptome	203	Y
F087103	Metagenome / Metatranscriptome	110	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_1000186621	F025021	AGGAG	MAELNFKGPVFKVTMTEYERGYGQRPMGEKFFDTEEEAKAFCEKWSDFSDPECFYRADYRKIA*
Draft_1000186635	F087103	GAG	MKLLYDDYNQIYVWIDDNDENVELSPHFDYLEDAEQWFQRIKQEVTK*
Draft_100018668	F018683	AGGAG	MVNPTKPKNGRTLTPSANLFKETIMEIKRFKQSQKFRVIVGPACFYATAKEIRNGIGDFTQCNAATQKALETLEFTRSSNGAAESAATGLAGTWEGLTVQLNLA*