Scaffold BBAY77_12530553

Overview

Basic Information

• Taxon OID: 3300000948
• Scaffold ID: BBAY77_12530553
• Source Dataset Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY77
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 12793
• Total Scaffold Genes: 34
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 28 (82.35%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 4 (100.00%)
• Associated Families: 4

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Source Dataset Sampling Location

• Location Name: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005352	Metagenome / Metatranscriptome	403	Y
F025150	Metagenome / Metatranscriptome	203	Y
F047922	Metagenome / Metatranscriptome	149	Y
F065219	Metagenome / Metatranscriptome	128	Y

Sequences

Protein ID	Family	RBS	Sequence
BBAY77_1253055323	F047922	GAGG	MTPQEIVDHKNKWRMASYFTSHVHSDLRSEVTQWCKDHCFQWRYDIKHFTDIYGDTVRFELEEDFNAFNDWYKERFYG*
BBAY77_1253055324	F005352	GAGG	MTHPALDKPYIQLICNPYEHHTSVNTRVTIDVMQKDLSRDDMLQVLEDFMKAMGYRFSNKESLCIEAYD*
BBAY77_1253055326	F025150	GGAG	MINVQTEGRDISKYSSFIDECIMSLFPEDATYDIYFEVKKFVDKDGSHAGFCMGDDIESVISLATHWVYEDGEEIAYEPHELAANIAHELVHAKQFYRGQINMVDNVWKHNNVNIDCDTIDYEDLPWEVEAYAYEVILTDLLWENV*
BBAY77_125305535	F065219	GGAG	MRYELSQCCNTGNWWIWKVEPCGYRSIVRTLSADLTIREANAYMDAYIEEMSNG*