3300000948: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY77

Overview

Basic Information

• IMG/M Taxon OID: 3300000948
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0085351 | Gp0056455 | Ga0011771
• Sample Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY77
• Sequencing Status: Permanent Draft
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 892332173
• Sequencing Scaffolds: 4
• Novel Protein Genes: 8
• Associated Families: 8

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1
Not Available	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Macroalgal Surface Microbial Communities
• Type: Host-Associated
• Taxonomy: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Surface (saline)

Location Information

• Location: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005352	Metagenome / Metatranscriptome	403	Y
F025150	Metagenome / Metatranscriptome	203	Y
F047922	Metagenome / Metatranscriptome	149	Y
F051159	Metagenome / Metatranscriptome	144	Y
F053218	Metagenome / Metatranscriptome	141	Y
F065219	Metagenome / Metatranscriptome	128	Y
F080526	Metagenome / Metatranscriptome	115	Y
F082762	Metagenome / Metatranscriptome	113	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
BBAY77_10024122	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2327
BBAY77_10127414	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	877
BBAY77_12530553	Not Available	12793
BBAY77_12536721	Not Available	616

Sequences

Scaffold ID	Protein ID	Family	Sequence
BBAY77_10024122	BBAY77_100241224	F051159	LIFAQLKTVVQMDNILIVLGILILGSAMGGTQLPKLPGAILSLGALFLALFNPHALDNMKAVFFIIPIILVVVGVMSYLAEKRLATEGANASSRDQLLGGSIFQVIFIMVVTIYFVSTFFYPHFS*
BBAY77_10127414	BBAY77_101274142	F080526	PNPLLPVAGAVVGVGTGTMISESVLMTPKAIGLFYVEIAKACYVSTGSKRIACGVAALACGTALIPGPHQGPFIVACAAAARGANKL*
BBAY77_10231626	BBAY77_102316261	F082762	VGNNNKKTNGHTDKKITLTVVDCCTPPPVRLAAHCLGAVAVITASIASPNPITIGSAIHLAKEIYDEC*
BBAY77_12530553	BBAY77_1253055323	F047922	MTPQEIVDHKNKWRMASYFTSHVHSDLRSEVTQWCKDHCFQWRYDIKHFTDIYGDTVRFELEEDFNAFNDWYKERFYG*
BBAY77_12530553	BBAY77_1253055324	F005352	MTHPALDKPYIQLICNPYEHHTSVNTRVTIDVMQKDLSRDDMLQVLEDFMKAMGYRFSNKESLCIEAYD*
BBAY77_12530553	BBAY77_1253055326	F025150	MINVQTEGRDISKYSSFIDECIMSLFPEDATYDIYFEVKKFVDKDGSHAGFCMGDDIESVISLATHWVYEDGEEIAYEPHELAANIAHELVHAKQFYRGQINMVDNVWKHNNVNIDCDTIDYEDLPWEVEAYAYEVILTDLLWENV*
BBAY77_12530553	BBAY77_125305535	F065219	MRYELSQCCNTGNWWIWKVEPCGYRSIVRTLSADLTIREANAYMDAYIEEMSNG*
BBAY77_12536721	BBAY77_125367212	F053218	MSKINARSPYYVTIGVNPTVANLTQVDMELYVYTGTQTTDRTNLFTLTSFAISNVVTFEISEIVRDYILNTFDGDYATDNVWVDYRTTSYIQGSAQTPSAYTQLTGFDSYGFYEDGANPQNDSGLLQSNTKVVKLDDAPATIPVYTEITNRVSYELDGELVYTKAITDSNESDEQIEYV