Scaffold BBAY92_10002261

Overview

Basic Information

• Taxon OID: 3300000947
• Scaffold ID: BBAY92_10002261
• Source Dataset Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4902
• Total Scaffold Genes: 13
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (7.69%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 4

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Source Dataset Sampling Location

• Location Name: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614

Associated Families

Family	Category	Number of Sequences	3D Structure?
F008073	Metagenome	339	Y
F024318	Metagenome	206	Y
F030017	Metagenome	186	Y
F034898	Metagenome / Metatranscriptome	173	Y

Sequences

Protein ID	Family	RBS	Sequence
BBAY92_1000226110	F008073	N/A	MKSTILKHLQKMEFVCGLKQFKDYNQDEAKELLECLVDLFSKYGWMTEARVDYILQAGMRGHYGDFYHVNEKTVSVWINQYYAHHQSQIVQEVQALNNKEKEPTDEEIAYWIEIGKQIFRDNYQHAIDTGFCRDLAEWGVNWFNKFQEKGILKPWEFNVENLESDVRKELRLTTRYVEESTVGAKTKNKIWKLFILDAIKNKKNLDQLI*
BBAY92_100022613	F024318	N/A	MKPYLYLGKFIQCPGDLAPKGVRSTYDKEKLSFNETFDRLWKLMRQ*
BBAY92_100022614	F030017	N/A	METNETMNEVKRLYIEGFTRKKIAAKLGLDAEKVGYLLYTKLKLHEIYPRKLMDENIFKILTDHQISRILTLATYGYNCSEIAEDQQLEYRKVRKLLDVAEAKNMFEKKV*
BBAY92_100022617	F034898	N/A	MTREEIITELNYRATQKYLIYLALQEIMLDYYEDVTILKAFDNDLKTKHKNMINALKRKSAEAFRFLENYEGGDATIKQFHEFVTLFERLHNSIDLGGGVFNDCLDAVEKILDQYERKESN*