Scaffold IMNBL3_c10000003

Overview

Basic Information

• Taxon OID: 3300000114
• Scaffold ID: IMNBL3_c10000003
• Source Dataset Name: Passalidae beetle gut microbial communities from Costa Rica -Larvae (3ML+3BL)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 215358
• Total Scaffold Genes: 217
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 150 (69.12%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Midgut → Unclassified → Passalidae Beetle Gut → Passalidae Beetle Gut Microbial Communities From Costa Rica

Source Dataset Sampling Location

• Location Name: Quebrada Gonzales Sector, Braulio Carrillo National Park, Costa Rica
• Coordinates
  • Lat. (^o): 10.207151
  • Long. (^o): -84.007673

Associated Families

Family	Category	Number of Sequences	3D Structure?
F066905	Metagenome	126	Y

Sequences

Protein ID	Family	RBS	Sequence
IMNBL3_10000003202	F066905	AGGAGG	MQEDRNCGCSCNNGGILNGMFGCGGDTEILFFIIIFLLLFTNFGCGCGRG*