Scaffold NasMGMT1_c112714

Overview

Basic Information

• Taxon OID: 2228664019
• Scaffold ID: NasMGMT1_c112714
• Source Dataset Name: Nasutitermes corniger hindgut microbial communities from Florida, USA - 2
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 660
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Hindgut → P3 Segment → Termite Hindgut → Termite Hindgut Microbial Communities From Amitermes Wheeleri In The Arizona Desert And From Nasutitermes Corniger In Florida, Usa

Source Dataset Sampling Location

• Location Name: Florida, USA
• Coordinates
  • Lat. (^o): 26.135833
  • Long. (^o): -80.129444

Associated Families

Family	Category	Number of Sequences	3D Structure?
F026033	Metagenome / Metatranscriptome	199	Y

Sequences

Protein ID	Family	RBS	Sequence
NasMGMT1_1127142	F026033	N/A	MEFQRTGRYDLMYMKTKELGWKENQGIQNIGIEDSQGNRIVEQSQVLKIWENYITELHDRPNRPVTLEVEPEEEVDADEKGPYILRSEVEKAIKEMRNKKATGDDDTPGDVFKLLGEGGLKIMTKLINTIYETGEWPKAFTEVTMIALKKKPQATKCSDHRT