2228664019: Nasutitermes corniger hindgut microbial communities from Florida, USA - 2

Overview

Basic Information

• IMG/M Taxon OID: 2228664019
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0045332 | Gp0051641 | Ga0010738
• Sample Name: Nasutitermes corniger hindgut microbial communities from Florida, USA - 2
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 36853872
• Sequencing Scaffolds: 2
• Novel Protein Genes: 2
• Associated Families: 2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Termite Hindgut Microbial Communities From Amitermes Wheeleri In The Arizona Desert And From Nasutitermes Corniger In Florida, Usa
• Type: Host-Associated
• Taxonomy: Host-Associated → Arthropoda → Digestive System → Hindgut → P3 Segment → Termite Hindgut → Termite Hindgut Microbial Communities From Amitermes Wheeleri In The Arizona Desert And From Nasutitermes Corniger In Florida, Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut

Location Information

• Location: Florida, USA
• Coordinates
  • Lat. (^o): 26.135833
  • Long. (^o): -80.129444
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005119	Metagenome / Metatranscriptome	411	Y
F026033	Metagenome / Metatranscriptome	199	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
NasMGMT1_c112714	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus	660
NasMGMT1_c112717	All Organisms → cellular organisms → Eukaryota → Opisthokonta	517

Sequences

Scaffold ID	Protein ID	Family	Sequence
NasMGMT1_c112714	NasMGMT1_1127142	F026033	MEFQRTGRYDLMYMKTKELGWKENQGIQNIGIEDSQGNRIVEQSQVLKIWENYITELHDRPNRPVTLEVEPEEEVDADEKGPYILRSEVEKAIKEMRNKKATGDDDTPGDVFKLLGEGGLKIMTKLINTIYETGEWPKAFTEVTMIALKKKPQATKCSDHRT
NasMGMT1_c112717	NasMGMT1_1127172	F005119	MRHDKVCTHLHYSICKALGIETADKWYTHMPKPVYEEGDVTVLWNQAVHTDREVTANRPDIIIKNKK