Scaffold AmiMGMT1_c411279

Overview

Basic Information

• Taxon OID: 2228664018
• Scaffold ID: AmiMGMT1_c411279
• Source Dataset Name: Amitermes wheeleri hindgut microbial communities from Arizona, USA - 3
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 580
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes → Coptotermes formosanus (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Hindgut → P3 Segment → Termite Hindgut → Termite Hindgut Microbial Communities From Amitermes Wheeleri In The Arizona Desert And From Nasutitermes Corniger In Florida, Usa

Source Dataset Sampling Location

• Location Name: Arizona, USA
• Coordinates
  • Lat. (^o): 31.519
  • Long. (^o): -110.001

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007036	Metagenome	359	Y

Sequences

Protein ID	Family	RBS	Sequence
AmiMGMT1_4112791	F007036	N/A	GIDSLPSFPGSSTVSSSSRFAVEGVFRESGVVHSLEMVDPVLFVFESHVLYSRDL