Basic Information | |
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IMG/M Taxon OID | 2228664018 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0045332 | Gp0051810 | Ga0011244 |
Sample Name | Amitermes wheeleri hindgut microbial communities from Arizona, USA - 3 |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | Y |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 107774793 |
Sequencing Scaffolds | 5 |
Novel Protein Genes | 6 |
Associated Families | 6 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta | 1 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes → Coptotermes formosanus | 2 |
Not Available | 1 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Termite Hindgut Microbial Communities From Amitermes Wheeleri In The Arizona Desert And From Nasutitermes Corniger In Florida, Usa |
Type | Host-Associated |
Taxonomy | Host-Associated → Arthropoda → Digestive System → Hindgut → P3 Segment → Termite Hindgut → Termite Hindgut Microbial Communities From Amitermes Wheeleri In The Arizona Desert And From Nasutitermes Corniger In Florida, Usa |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal proximal gut |
Location Information | ||||||||
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Location | Arizona, USA | |||||||
Coordinates | Lat. (o) | 31.519 | Long. (o) | -110.001 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F000176 | Metagenome | 1754 | Y |
F001073 | Metagenome | 786 | Y |
F007036 | Metagenome | 359 | Y |
F007320 | Metagenome | 353 | Y |
F018445 | Metagenome | 235 | Y |
F031909 | Metagenome | 181 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
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AmiMGMT1_c411036 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta | 739 | Open in IMG/M |
AmiMGMT1_c411279 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes → Coptotermes formosanus | 580 | Open in IMG/M |
AmiMGMT1_c411427 | Not Available | 516 | Open in IMG/M |
AmiMGMT1_c411545 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 658 | Open in IMG/M |
AmiMGMT1_c413281 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes → Coptotermes formosanus | 532 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
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AmiMGMT1_c411036 | AmiMGMT1_4110362 | F018445 | MGMLGPLLNRKSDLSIRNGDLLYKQLIRSMMDYACPAWRSAARTHVQRLQVLQSKCFRLATDARWYISKRQIHEDLGVPLFADHIRALTASFDSRLADVGNPLVRQLGRYLS |
AmiMGMT1_c411279 | AmiMGMT1_4112791 | F007036 | GIDSLPSFPGSSTVSSSSRFAVEGVFRESGVVHSLEMVDPVLFVFESHVLYSRDL |
AmiMGMT1_c411427 | AmiMGMT1_4114272 | F001073 | VVAAHYKKDDLLNCCTNSSDISGYHADFQEGHGTVGAWQGHGMACVN |
AmiMGMT1_c411545 | AmiMGMT1_4115452 | F031909 | MEVKMTFYMKKVMHRVKTTMKMILVAVTMIFWVSMMN |
AmiMGMT1_c413281 | AmiMGMT1_4132812 | F007320 | RKTRKYRELANEICAMWKQNTVQVIPIVISSTGVIPKSLSQSLKRLNLHPNTYIQMQKSVILGTCSIVRNFLNYK |
AmiMGMT1_c413422 | AmiMGMT1_4134222 | F000176 | MWNLKCTIIPVIIGATGIVTRSLSKNLEAIPGKHSIDSLQKTAILGTSHIIRKVLQCEA |
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