Scaffold DRAFT_c116103

Overview

Basic Information

• Taxon OID: 2222084002
• Scaffold ID: DRAFT_c116103
• Source Dataset Name: Subtropical soil microbial communities from Bundaberg Australia-sugarcane farm
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: Australian Genome Research Facility
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 510
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Sediment → Unclassified → Subtropical Soil → Subtropical Soil Microbial Communities From Bundaberg Australia

Source Dataset Sampling Location

• Location Name: Australia: Bundaberg, Queensland
• Coordinates
  • Lat. (^o): -24.9
  • Long. (^o): 152.39
  • Depth (m): 0 to .03

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007695	Metagenome / Metatranscriptome	346	Y

Sequences

Protein ID	Family	RBS	Sequence
DRAFT_00588130	F007695	N/A	VKRRDPWHRANVPTKSEADPALRGKDADKNSQTCLDLVVSRWRNHQLKQAEKPHSKFSARKTLDGPATRPKTPLAVENSVGKLAAP