Scaffold 2207183787

Overview

Basic Information

• Taxon OID: 2199352036
• Scaffold ID: 2207183787
• Source Dataset Name: Marine microbial communities from Deepwater Horizon oil blowout, Alabama, USA - Oil_sample_6
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Alabama State University
• Sequencing Status: Finished

Scaffold Components

• Scaffold Length (bps): 556
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp. (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated → Marine → Marine Microbial Communities From Deepwater Horizon Oil Blowout, Alabama, Usa

Source Dataset Sampling Location

• Location Name: USA: Alabama
• Coordinates
  • Lat. (^o): 30.15
  • Long. (^o): -88.446

Associated Families

Family	Category	Number of Sequences	3D Structure?
F034342	Metagenome / Metatranscriptome	175	Y

Sequences

Protein ID	Family	RBS	Sequence
2209056199	F034342	N/A	VKKPFKTPKNRALGASKESNFALGDIVSWKTWEISLENEIFETKEGLLIEIIEETRLENVVLIAKIMPFGASEYEFIPLFPSKKHKTGLFIACLARLRTQLTTI