Scaffold GZGNO2B01DZMEW

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold GZGNO2B01DZMEW

Scaffold GZGNO2B01DZMEW

Overview

Basic Information
Taxon OID	2170459023 Open in IMG/M
Scaffold ID	GZGNO2B01DZMEW Open in IMG/M
Source Dataset Name	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	454 Life Sciences
Sequencing Status	Finished

Scaffold Components
Scaffold Length (bps)	517
Total Scaffold Genes	3 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil → Grass Soil Microbial Communities From Rothamsted Park Plot 3D, Harpenden, Uk

Source Dataset Sampling Location
Location Name	USA: Maryland: Natonal Institute of Health
Coordinates	Lat. (^o)	39.0042816	Long. (^o)	-77.1012173	Alt. (m)		Depth (m)	0 to .21
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F055226	Metagenome / Metatranscriptome	139	Y

Sequences

Protein ID	Family	RBS	Sequence
FA3_11383630	F055226	N/A	DFWVVEAVEALAAAGQAADMMTAALAQAGKTAGELRPAR

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