Scaffold Baltic_Sea__contig05359

Overview

Basic Information

• Taxon OID: 2149837002
• Scaffold ID: Baltic_Sea__contig05359
• Source Dataset Name: Marine microbial communities from the Baltic Sea
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Royal Institute of Technology
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 590
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea

Source Dataset Sampling Location

• Location Name: Baltic Sea
• Coordinates
  • Lat. (^o): 59.888937
  • Long. (^o): 24.847412

Associated Families

Family	Category	Number of Sequences	3D Structure?
F011815	Metagenome / Metatranscriptome	287	Y

Sequences

Protein ID	Family	RBS	Sequence
Baltic_Sea_00200610	F011815	N/A	DLDQISKDLSFGVSYSQQKRNDHARALCNKVGDAILGYADGITAQVEAKTNESMTEMNAHNISAMIFYDVQLQEFMNGLGMAANDALILAVNRLKSLQKLYLFEQKGGENYLG