Scaffold MXFT_Contig6727

Overview

Basic Information

• Taxon OID: 2088090021
• Scaffold ID: MXFT_Contig6727
• Source Dataset Name: Sample MXFT-1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: National Research Council of Canada
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2918
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (25.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Mammals → Digestive System → Unclassified → Unclassified → Rumen → Rumen Microbial Communities Of Musk Oxen From Alaska

Source Dataset Sampling Location

• Location Name: Fairbanks, Alaska
• Coordinates
  • Lat. (^o): 64.880776
  • Long. (^o): -147.869984

Associated Families

Family	Category	Number of Sequences	3D Structure?
F076635	Metagenome / Metatranscriptome	118	Y

Sequences

Protein ID	Family	RBS	Sequence
MXFT_00583660	F076635	N/A	TKGLIMIKRGTKVRVIKMDDAGGGFGWQAKQLNGRIFTVRYMDATKQIHLEETGIALIPGVDQYEIVKENE