Scaffold GSLSAS_GLMUJHB02GM20N

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold GSLSAS_GLMUJHB02GM20N

Scaffold GSLSAS_GLMUJHB02GM20N

Overview

Basic Information
Taxon OID	2077657010 Open in IMG/M
Scaffold ID	GSLSAS_GLMUJHB02GM20N Open in IMG/M
Source Dataset Name	Saline water microbial communities from Great Salt Lake, Utah, sample from South Arm Stromatolite
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	513
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water → Saline Water Microbial Communities From Great Salt Lake, Utah

Source Dataset Sampling Location
Location Name	Great Salt Lake
Coordinates	Lat. (^o)	41.454358	Long. (^o)	-112.666397	Alt. (m)		Depth (m)	2
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F050177	Metagenome	145	N

Sequences

Protein ID	Family	RBS	Sequence
GSLSAS_02734200	F050177	N/A	MARVPSDPPDDALTPQQLADRVDDVVNLTVEELEAFRESEYNEEYLEYNSERAQRGNEPLDDVIRLLDTPRDEWRDVDDGFNEIAEARELLDFQRRTQAQIKSQGLGTNTIAEYDDMTFREAASI

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