2077657010: Saline water microbial communities from Great Salt Lake, Utah, sample from South Arm Stromatolite

Overview

Basic Information

• IMG/M Taxon OID: 2077657010
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0060782 | Gp0051796 | Ga0026433
• Sample Name: Saline water microbial communities from Great Salt Lake, Utah, sample from South Arm Stromatolite
• Sequencing Status: Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 156436365
• Sequencing Scaffolds: 2
• Novel Protein Genes: 2
• Associated Families: 2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Saline Water Microbial Communities From Great Salt Lake, Utah
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water → Saline Water Microbial Communities From Great Salt Lake, Utah

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → lake → saline water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: Great Salt Lake
• Coordinates
  • Lat. (^o): 41.454358
  • Long. (^o): -112.666397
  • Alt. (m): N/A
  • Depth (m): 2

Associated Families

Family	Category	Number of Sequences	3D Structure?
F050177	Metagenome	145	N
F084096	Metagenome / Metatranscriptome	112	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
GSLSAS_GLMUJHB02GM20N	Not Available	513
GSLSAS_GLMUJHB02HHSC7	Not Available	514

Sequences

Scaffold ID	Protein ID	Family	Sequence
GSLSAS_GLMUJHB02GM20N	GSLSAS_02734200	F050177	MARVPSDPPDDALTPQQLADRVDDVVNLTVEELEAFRESEYNEEYLEYNSERAQRGNEPLDDVIRLLDTPRDEWRDVDDGFNEIAEARELLDFQRRTQAQIKSQGLGTNTIAEYDDMTFREAASI
GSLSAS_GLMUJHB02HHSC7	GSLSAS_00092930	F084096	LVGAGLVVPTSGTVQYEQIAGGITRDTLWDSLKIMPNTPSNLEVHCVLLNNITIKEVAKFTRNEMGGDLSEEVMRNGWTLSEALGVKWVITIKKGLVPTNTMYHFADPKFIGKSYMLEDTTMYIRREAYFIEFFAYESLGGTLGHSSGLARVDFT