Scaffold EF_singleton_cluster_11367

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold EF_singleton_cluster_11367

Scaffold EF_singleton_cluster_11367

Overview

Basic Information
Taxon OID	2070309007 Open in IMG/M
Scaffold ID	EF_singleton_cluster_11367 Open in IMG/M
Source Dataset Name	EF-deduplicated data
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Illinois, Urbana-Champaign
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	524
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore

Source Dataset Sampling Location
Location Name	Singapore: Singapore
Coordinates	Lat. (^o)	1.332	Long. (^o)	103.756	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F002371	Metagenome / Metatranscriptome	566	Y

Sequences

Protein ID	Family	RBS	Sequence
EF_02445650	F002371	GAG	VLGVKKETRGGTRQGSGAKPKYNEQTKTVAFRCPLSKVDELKLIVKSKLSEWSVK

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