Scaffold FACENCT_F37DT1O01EIM6Q

Overview

Basic Information

• Taxon OID: 2035918005
• Scaffold ID: FACENCT_F37DT1O01EIM6Q
• Source Dataset Name: Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2+
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 525
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Sand → Desert → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location

• Location Name: Nevada Desert Research Center
• Coordinates
  • Lat. (^o): 36.766667
  • Long. (^o): -115.95

Associated Families

Family	Category	Number of Sequences	3D Structure?
F066523	Metagenome / Metatranscriptome	126	Y

Sequences

Protein ID	Family	RBS	Sequence
FACENCTE_7336880	F066523	AGGAGG	MPFDPELDASQPELDASQRRQVERLVRCAGKTCEVCDYEDLSCDDRAVRTMSRGISVRLFCNNRKDHADGVVGTEQPLFA