Scaffold Nasutiter_Contig26261

Overview

Basic Information

• Taxon OID: 2030936001
• Scaffold ID: Nasutiter_Contig26261
• Source Dataset Name: Nasutitermes corniger hindgut microbial communities from Florida, USA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 569
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Polychaeta → Sedentaria → Scolecida → Capitellidae → Capitella → Capitella teleta (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Hindgut → P3 Segment → Termite Hindgut → Termite Hindgut Microbial Communities From Amitermes Wheeleri In The Arizona Desert And From Nasutitermes Corniger In Florida, Usa

Source Dataset Sampling Location

• Location Name: Florida, USA
• Coordinates
  • Lat. (^o): 26.135
  • Long. (^o): -80.129

Associated Families

Family	Category	Number of Sequences	3D Structure?
F026033	Metagenome / Metatranscriptome	199	Y

Sequences

Protein ID	Family	RBS	Sequence
Nasutiterm_285980	F026033	N/A	PETKKRIRKEPQIMTKKEYLKNICNEIMEFQRTGRYDLMYMKTKELGWKENQGIQNIGIEDSQGNRIVEQSQVLKIWENYITELHDRPNRPVTLEVEPEEEVDADEKGPYILRSEVEKAIKEMRNKKATGDDDTPGDVFKLLGEGGLKIMTKLINTIYETGEWPKAFTEVTMIALKKKPQATKCSDHRT