2030936001: Nasutitermes corniger hindgut microbial communities from Florida, USA

Overview

Basic Information

• IMG/M Taxon OID: 2030936001
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0045332 | Gp0051385 | Ga0011077
• Sample Name: Nasutitermes corniger hindgut microbial communities from Florida, USA
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 70019037
• Sequencing Scaffolds: 7
• Novel Protein Genes: 7
• Associated Families: 7

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Polychaeta → Sedentaria → Scolecida → Capitellidae → Capitella → Capitella teleta	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Termopsidae → Termopsinae → Termopsini → Zootermopsis → Zootermopsis nevadensis	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Parasitoida → Chalcidoidea → Pteromalidae → Pteromalinae → Nasonia → Nasonia vitripennis	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes → Coptotermes formosanus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Termite Hindgut Microbial Communities From Amitermes Wheeleri In The Arizona Desert And From Nasutitermes Corniger In Florida, Usa
• Type: Host-Associated
• Taxonomy: Host-Associated → Arthropoda → Digestive System → Hindgut → P3 Segment → Termite Hindgut → Termite Hindgut Microbial Communities From Amitermes Wheeleri In The Arizona Desert And From Nasutitermes Corniger In Florida, Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut

Location Information

• Location: Florida, USA
• Coordinates
  • Lat. (^o): 26.135
  • Long. (^o): -80.129
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000731	Metagenome	916	Y
F001172	Metagenome	757	Y
F021793	Metagenome	217	Y
F026033	Metagenome / Metatranscriptome	199	Y
F028031	Metagenome	193	Y
F063804	Metagenome	129	Y
F087385	Metagenome	110	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Nasutiter_Contig23334	Not Available	1273
Nasutiter_Contig25923	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1074
Nasutiter_Contig26261	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Polychaeta → Sedentaria → Scolecida → Capitellidae → Capitella → Capitella teleta	569
Nasutiter_Contig45313	Not Available	731
Nasutiter_FTJKGMZ01BG8QZ	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Termopsidae → Termopsinae → Termopsini → Zootermopsis → Zootermopsis nevadensis	504
Nasutiter_FTJKGMZ01BRE13	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Parasitoida → Chalcidoidea → Pteromalidae → Pteromalinae → Nasonia → Nasonia vitripennis	542
Nasutiter_FTJKGMZ01CBF76	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes → Coptotermes formosanus	505

Sequences

Scaffold ID	Protein ID	Family	Sequence
Nasutiter_Contig23334	Nasutiterm_1349800	F028031	MQRSYAEYGTETRIEPTEGTGIYSLVFIPYVPNMSSKHLALQVIKYV
Nasutiter_Contig25923	Nasutiterm_1065910	F021793	LSPILFNLYSEYLTKEALEGLGDFKIGGQIIHTVKYADDLVLLAKEEKVLQDMMIN
Nasutiter_Contig26261	Nasutiterm_285980	F026033	PETKKRIRKEPQIMTKKEYLKNICNEIMEFQRTGRYDLMYMKTKELGWKENQGIQNIGIEDSQGNRIVEQSQVLKIWENYITELHDRPNRPVTLEVEPEEEVDADEKGPYILRSEVEKAIKEMRNKKATGDDDTPGDVFKLLGEGGLKIMTKLINTIYETGEWPKAFTEVTMIALKKKPQATKCSDHRT
Nasutiter_Contig45313	Nasutiterm_492870	F087385	FRQKKPGSYLLSRPSGGRVPSAQEGLTSVFEMGTGVTPPQ
Nasutiter_FTJKGMZ01BG8QZ	Nasutiterm_2028140	F063804	PLGGPLARSHVRRLQVLQSKCLRLATGAPLVRNRQIHEDLGVPLFADHIRALTASFDSKLADVKNPLARQLGRYLS
Nasutiter_FTJKGMZ01BRE13	Nasutiterm_194150	F000731	SFNRTQTRVFIGLLTGHNTLRRHLHIMGLCNDPMCRKCGTEKETSVHILCECEALTSLRHSYLGSFFLDLEDMRELNMGAIWNFAKGTGFI
Nasutiter_FTJKGMZ01CBF76	Nasutiterm_1467360	F001172	QLYALPXLYLCVLIYLRTNSDLCHLQPKLIGFYKRDEKCLQRGTDWAFK