Scaffold YNPsite07_CeleraDRAF_deg1119010697304

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold YNPsite07_CeleraDRAF_deg1119010697304

Scaffold YNPsite07_CeleraDRAF_deg1119010697304

Overview

Basic Information
Taxon OID	2022920013 Open in IMG/M
Scaffold ID	YNPsite07_CeleraDRAF_deg1119010697304 Open in IMG/M
Source Dataset Name	Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP7 Chocolate Pots
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	983
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Source Dataset Sampling Location
Location Name	Yellowstone National Park, WY
Coordinates	Lat. (^o)	44.710087	Long. (^o)	-110.7413395	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F057782	Metagenome / Metatranscriptome	136	Y

Sequences

Protein ID	Family	RBS	Sequence
YNPsite07_CeleraDRAFT_314610	F057782	N/A	LSPLLKGGEGRGEGGSYTRMPCPFGALLVTLYQFKSKAFLM

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