Scaffold VrWwTxAD_contig59140

Overview

Basic Information

• Taxon OID: 2020350001
• Scaffold ID: VrWwTxAD_contig59140
• Source Dataset Name: Viral communities in wastewater treatment process (AD)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Illinois, Urbana-Champaign
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5795
• Total Scaffold Genes: 14
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 12 (85.71%)
• Novel Protein Genes: 5
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (60.00%)
• Associated Families: 5

Taxonomy: All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium ADurb.Bin276 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Unclassified → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore

Source Dataset Sampling Location

• Location Name: Singapore: Singapore
• Coordinates
  • Lat. (^o): 1.332
  • Long. (^o): 103.756

Associated Families

Family	Category	Number of Sequences	3D Structure?
F059692	Metagenome / Metatranscriptome	133	N
F071725	Metagenome	122	N
F072892	Metagenome	121	N
F076577	Metagenome	118	N
F096294	Metagenome	105	Y

Sequences

Protein ID	Family	RBS	Sequence
AD_265230	F076577	AGGAGG	VNLWPESKVLALMELAFHFGAINYELNNGKKRREMWKEFKENAIDKRLKYVNPDPRCTHPVNLDVIDYCWGYARKIDKGEEIGMEELCEGCEFFKKEANNENPTQSN
AD_265240	F071725	AGGAGG	MKTLLNQTESEYLNLGSLDQELSWVLKIYSSGKINDLIYDGLLLFATDEEIKAIREKWERKEINEVGLFHELEKLSKVESLPG
AD_265330	F059692	N/A	MDKETEQLILKKLQLDYLSLHAVLTDLEKIISALVVDLDPRVNEIQRIQDQMKECLRGS
AD_265350	F072892	GGAGG	MNINLLKTISTRLFGLYSQFKSIVSDLETNNTLDNREWAEGLLNHLSAELYYEANCLTDVLFPPKIEEKDEVMFKIDGIIDAGRNPMSEDEFCELFLKWAEENKLQFGGGLGVYREEEEGEPLAGE
AD_265360	F096294	N/A	SSSAEPLETKHYRLITQEQYEAELKEAYFSGWEDRNDNELTEIFHKRSRTKEEYFKWFMEELRKA