Scaffold PelMarPul_NODE_608_len_997_cov_54_885658

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold PelMarPul_NODE_608_len_997_cov_54_885658

Scaffold PelMarPul_NODE_608_len_997_cov_54_885658

Overview

Basic Information
Taxon OID	2019105005 Open in IMG/M
Scaffold ID	PelMarPul_NODE_608_len_997_cov_54_885658 Open in IMG/M
Source Dataset Name	Marine microbial communities from Pulau Tioman, Malaysia
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Illumina
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1023
Total Scaffold Genes	4 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (100.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine → Marine Microbial Community From Pulau Tioman, Malaysia

Source Dataset Sampling Location
Location Name	Pulau Tioman, Malaysia (South China Sea)
Coordinates	Lat. (^o)	2.8	Long. (^o)	104.2	Alt. (m)		Depth (m)	2
Location on Map

Zoom:	Powered by OpenStreetMap^©

Associated Families

Family	Category	Number of Sequences	3D Structure?
F040392	Metagenome	162	N

Sequences

Protein ID	Family	RBS	Sequence
MgKW_34110	F040392	AGCAG	MTERQIRATIRTAHHYGGSFFSTLAAAALAADPRNRSRILDAFPEIIAKYGPGSSYYDES

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