Scaffold YNP9_FWOU21297_g1

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold YNP9_FWOU21297_g1

Scaffold YNP9_FWOU21297_g1

Overview

Basic Information
Taxon OID	2014031004 Open in IMG/M
Scaffold ID	YNP9_FWOU21297_g1 Open in IMG/M
Source Dataset Name	Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP9 Dragon Spring, Norris Geyser Basin
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	798
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Source Dataset Sampling Location
Location Name	Yellowstone National Park, WY
Coordinates	Lat. (^o)	44.7318889	Long. (^o)	-110.7110833	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F061391	Metagenome	132	N

Sequences

Protein ID	Family	RBS	Sequence
YNP9_206960	F061391	AGGTGG	VSEVIQTPIDITELLTLTGRSRVLTEKVKRCYALVTNPKTFEGVAASLRGYDAASGGWFIPHATHAKQVIQPVIQECVVEPLTMVATGNDAHSLVTLAEFADMLGVDVDVRAVSLQDIIELKLSSCLPQGDGKKPPAYADLVNATSNCLREIVTKALVTLEHVGAAIAFTSRRG

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