Metagenome / Metatranscriptome Family F105988

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F105988
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	106 residues
Representative Sequence	MSKRNQTGQPGVSAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAA
Number of Associated Samples	86
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.00 %
% of genes near scaffold ends (potentially truncated)	99.00 %
% of genes from short scaffolds (< 2000 bps)	96.00 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (22.000 % of family members)
Environment Ontology (ENVO)	Unclassified (28.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.99% β-sheet: 0.00% Coil/Unstructured: 47.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF00069	Pkinase	3.00
PF02775	TPP_enzyme_C	3.00
PF04879	Molybdop_Fe4S4	2.00
PF13242	Hydrolase_like	2.00
PF01613	Flavin_Reduct	2.00
PF01568	Molydop_binding	2.00
PF01545	Cation_efflux	2.00
PF13244	MbhD	1.00
PF13185	GAF_2	1.00
PF01841	Transglut_core	1.00
PF00920	ILVD_EDD	1.00
PF00361	Proton_antipo_M	1.00
PF07690	MFS_1	1.00
PF03334	PhaG_MnhG_YufB	1.00
PF13247	Fer4_11	1.00
PF00486	Trans_reg_C	1.00
PF14417	MEDS	1.00
PF13432	TPR_16	1.00
PF00196	GerE	1.00
PF10025	DUF2267	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	12.00
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	2.00
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	2.00
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	2.00
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	2.00
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	2.00
COG1320	Multisubunit Na+/H+ antiporter, MnhG subunit	Inorganic ion transport and metabolism [P]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	92.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	92.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	87.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	64.00 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	10.00 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	2.00 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	64.00 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	10.00 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	2.00 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	64.00 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	9.00 %
Devosia enhydra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia enhydra	2.00 %
Janibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	64.00 %
Streptomyces scabiei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabiei	6.00 %
Devosia enhydra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia enhydra	2.00 %
Streptomyces klenkii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces klenkii	1.00 %
unclassified Janibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter → unclassified Janibacter	1.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	64.00 %
Streptomyces scabiei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabiei	6.00 %
Devosia enhydra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia enhydra	2.00 %
Janibacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter → unclassified Janibacter → Janibacter sp.	1.00 %
Streptomyces klenkii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces klenkii	1.00 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig08239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1119	Open in IMG/M
3300000955\|JGI1027J12803_103737831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabiei	621	Open in IMG/M
3300001408\|JGI20206J14855_1048525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	615	Open in IMG/M
3300001461\|JGI12698J15209_1001689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1190	Open in IMG/M
3300001593\|JGI12635J15846_10654400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabiei	608	Open in IMG/M
3300002245\|JGIcombinedJ26739_100269557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1589	Open in IMG/M
3300005181\|Ga0066678_10207686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1253	Open in IMG/M
3300005434\|Ga0070709_10607623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	842	Open in IMG/M
3300005435\|Ga0070714_100335645	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300005436\|Ga0070713_100336582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1397	Open in IMG/M
3300005436\|Ga0070713_100910843	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005436\|Ga0070713_102276566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia enhydra	524	Open in IMG/M
3300005437\|Ga0070710_11133548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabiei	575	Open in IMG/M
3300005439\|Ga0070711_100502830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	999	Open in IMG/M
3300005439\|Ga0070711_101147648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	671	Open in IMG/M
3300005439\|Ga0070711_101970300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter → unclassified Janibacter → Janibacter sp.	513	Open in IMG/M
3300005456\|Ga0070678_100512016	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300005545\|Ga0070695_101394508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	581	Open in IMG/M
3300005549\|Ga0070704_101298829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabiei	666	Open in IMG/M
3300005559\|Ga0066700_10404087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	963	Open in IMG/M
3300005617\|Ga0068859_101608305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia enhydra	718	Open in IMG/M
3300006028\|Ga0070717_11022908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300006163\|Ga0070715_10378667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300006175\|Ga0070712_100929745	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300006175\|Ga0070712_101488321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabiei	591	Open in IMG/M
3300006176\|Ga0070765_100157388	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300006176\|Ga0070765_101820725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	571	Open in IMG/M
3300006237\|Ga0097621_100234868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1601	Open in IMG/M
3300006237\|Ga0097621_101360775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabiei	671	Open in IMG/M
3300006755\|Ga0079222_10766490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	780	Open in IMG/M
3300006804\|Ga0079221_10043341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1981	Open in IMG/M
3300006806\|Ga0079220_10334339	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300006806\|Ga0079220_10606475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	779	Open in IMG/M
3300006806\|Ga0079220_11711784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	550	Open in IMG/M
3300006903\|Ga0075426_11010661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	629	Open in IMG/M
3300010396\|Ga0134126_11601167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	716	Open in IMG/M
3300010880\|Ga0126350_11773503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	541	Open in IMG/M
3300013104\|Ga0157370_10808621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	853	Open in IMG/M
3300017994\|Ga0187822_10177357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	699	Open in IMG/M
3300018468\|Ga0066662_11147753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	781	Open in IMG/M
3300020077\|Ga0206351_10587418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1423	Open in IMG/M
3300020582\|Ga0210395_10434426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	988	Open in IMG/M
3300020582\|Ga0210395_10873930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	669	Open in IMG/M
3300021088\|Ga0210404_10040092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2151	Open in IMG/M
3300021181\|Ga0210388_11619404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	538	Open in IMG/M
3300021401\|Ga0210393_11238124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	600	Open in IMG/M
3300021403\|Ga0210397_11580625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	509	Open in IMG/M
3300021406\|Ga0210386_10467378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1090	Open in IMG/M
3300021406\|Ga0210386_11247322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	627	Open in IMG/M
3300021477\|Ga0210398_11339664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	561	Open in IMG/M
3300024288\|Ga0179589_10060832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1452	Open in IMG/M
3300025885\|Ga0207653_10231678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	704	Open in IMG/M
3300025898\|Ga0207692_10304228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	971	Open in IMG/M
3300025898\|Ga0207692_11014155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	548	Open in IMG/M
3300025904\|Ga0207647_10441721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	730	Open in IMG/M
3300025906\|Ga0207699_10711961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	735	Open in IMG/M
3300025914\|Ga0207671_10819485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	738	Open in IMG/M
3300025915\|Ga0207693_10131753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1965	Open in IMG/M
3300025915\|Ga0207693_10765158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	746	Open in IMG/M
3300025916\|Ga0207663_10195085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1457	Open in IMG/M
3300025917\|Ga0207660_11123473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	640	Open in IMG/M
3300025925\|Ga0207650_11381163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	599	Open in IMG/M
3300025928\|Ga0207700_10378814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1237	Open in IMG/M
3300025929\|Ga0207664_10711719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	903	Open in IMG/M
3300025934\|Ga0207686_10680512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	816	Open in IMG/M
3300025945\|Ga0207679_10241266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1531	Open in IMG/M
3300025961\|Ga0207712_12067395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	510	Open in IMG/M
3300026023\|Ga0207677_11347418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	656	Open in IMG/M
3300026118\|Ga0207675_102029333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	592	Open in IMG/M
3300026142\|Ga0207698_11691570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	648	Open in IMG/M
3300026498\|Ga0257156_1098448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	609	Open in IMG/M
3300026899\|Ga0209326_1017453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	566	Open in IMG/M
3300027058\|Ga0209111_1009861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1033	Open in IMG/M
3300027119\|Ga0209522_1006965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces klenkii	1145	Open in IMG/M
3300027590\|Ga0209116_1118833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	580	Open in IMG/M
3300027725\|Ga0209178_1023228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1932	Open in IMG/M
3300027765\|Ga0209073_10044766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1431	Open in IMG/M
3300027765\|Ga0209073_10388081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	570	Open in IMG/M
3300027817\|Ga0209112_10034135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1516	Open in IMG/M
3300027884\|Ga0209275_10383711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	791	Open in IMG/M
3300028573\|Ga0265334_10117078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	954	Open in IMG/M
3300028713\|Ga0307303_10135118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	585	Open in IMG/M
3300028789\|Ga0302232_10658037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	514	Open in IMG/M
3300028824\|Ga0307310_10385196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	694	Open in IMG/M
3300029943\|Ga0311340_10926717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	722	Open in IMG/M
3300030007\|Ga0311338_11035811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	793	Open in IMG/M
3300030013\|Ga0302178_10322829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	705	Open in IMG/M
3300030520\|Ga0311372_12927234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	519	Open in IMG/M
3300030617\|Ga0311356_11885410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	531	Open in IMG/M
3300031231\|Ga0170824_115557168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	882	Open in IMG/M
3300031469\|Ga0170819_11707363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	701	Open in IMG/M
3300031525\|Ga0302326_11571373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	876	Open in IMG/M
3300031711\|Ga0265314_10010657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7649	Open in IMG/M
3300031712\|Ga0265342_10025607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3706	Open in IMG/M
3300032205\|Ga0307472_100481269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1064	Open in IMG/M
3300032770\|Ga0335085_10555972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1299	Open in IMG/M
3300032828\|Ga0335080_11147556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	784	Open in IMG/M
3300032895\|Ga0335074_10366069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1590	Open in IMG/M
3300032898\|Ga0335072_11725428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	521	Open in IMG/M
3300033158\|Ga0335077_12115905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.00%
Host-Associated	Host-Associated	18.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.00%
Plants	Host-Associated → Plants	18.00%
Aquatic	Environmental → Aquatic	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.00%
Peat	Environmental → Terrestrial → Peat	7.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.00%
Roots	Host-Associated → Plants → Roots	2.00%
Freshwater	Environmental → Aquatic → Freshwater	1.00%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	36.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.00%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.00%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.00%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	22.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	8.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.00%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.00%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.00%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001408	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012	Environmental	Open in IMG/M
3300001461	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00289160	2166559006	Grass Soil	RAERGDGAPGPGRPGWLFLVAGGLIYAGALLGMWIVLAGQPDVQDLVVGSAAAVLAVGTGYLVSERGKMVPSARVADLRTLAGPCRGRWWSETGQVFALAPARRPAARSRRVRCAACR
JGI1027J12803_1037378311	3300000955	Soil	MSKRNQTGQLGVSASGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAAR
JGI20206J14855_10485251	3300001408	Arctic Peat Soil	VPERGGQARRRGVSSPGPERPRWPLLVAGALVYAGALLGVWIVLAGQPDVSDLIAGSVAAVFAVGVSYFLSQQGKMVPGLRAGDLRAVAAVPWQVVTESAQVLALAARKA
JGI12698J15209_10016891	3300001461	Forest Soil	MPRQHQAGQPEDGAPGPERPSWLSLVTSGLVYAGVLLGMWIVLAGQPDAQDLVAGSAAAVVAVGAGYFISQRGRMVPSVRAADLRTLAAVPWR
JGI12635J15846_106544001	3300001593	Forest Soil	MARRHQTGRRGDSAPGLERPRWLFLVTGGLVYSGALLGMWIVLAGQPDAQDLALGSVAAVLAVGVGYLLSQRGKMVPSVQAADLRTLAAVPWQVVVETGQVFALA
JGIcombinedJ26739_1002695575	3300002245	Forest Soil	VAERGDQARRRGESPTGPERPRWPFLVAGGLVYAGALLGVWIVLAGEPDVSDLIAGSVAAVFSVGVGYFLSGRGKMVPALRAADVRVLAAMPWQVVAESARV
Ga0066678_102076861	3300005181	Soil	MSKRSQAGRRGDGAPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDIQDLVVGSAAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAAGRP
Ga0070709_106076232	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPKRNQAGQPGDGAPGPERPGWLFLAAAGVIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSQRGKMVPSARVADLRTLAGVPWQVVAETGQVFA
Ga0070714_1003356451	3300005435	Agricultural Soil	MSKRNQTGQPGVSAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVP
Ga0070713_1003365821	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQTGQPGVSAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSAQVADLR
Ga0070713_1009108432	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAKQNPGREAGRRDVPGPERPRWLFLVIGGLVYAGALLGMWIVLAGQPDVQDLAAGSAAAVLAVGVGYLLSQRGKMVPSVRAADLRTLAGVPWQVVTETGQVFALAARKASG
Ga0070713_1022765661	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQTGQLGANAPGPERPGPLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAE
Ga0070710_111335481	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQAGQRGDGTPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDVQDLVVGSAAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAAGRPVAP
Ga0070711_1005028301	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQTGQLGISAPGPERPGQLSLAAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLA
Ga0070711_1011476481	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSQRNQAGQREADAAGPQRPRWLFLAAGGLIYAGALLGMWIVLAGQPDVQDLVLGSAAAVAAVGVGYFVGQRGRMVPSVRAADLRTLAAVPWQVVAETGQVFALAARKAAG
Ga0070711_1019703001	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPGRNHAGQRGSDASGPKRPGWPFLIAGGLIYAGALLGMWIVLAGQPDIQDLVVGSAAAVLAVGVGYLVSERGTMVPSARAADLQTLARVPWQVVAETGQVFALAARKAAGREVA
Ga0070678_1005120161	3300005456	Miscanthus Rhizosphere	MSKRNQTGQLGASAPGPERPGWLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVV
Ga0070695_1013945082	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQAGQRGDGTPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDVQDLVVGSAAAVLAVGTGYLVSERGKMVPSARVADLRTLAGVPWQVVAETGKVFALAAR
Ga0070704_1012988291	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQTGQLGISAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAVGR
Ga0066700_104040872	3300005559	Soil	MPKRNQAGQPGDGAPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSQRGKMVPSARIADLRTLAGVPWQVVAETGQVLALAARKAAGR
Ga0068859_1016083051	3300005617	Switchgrass Rhizosphere	MSKRNQTGQLGASAPGPERPGWLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAV
Ga0070717_110229081	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQAGQRGDGAPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDVQDLVVGSAAAVLAVGTGYLVSERGKMVPSARVADLRTLAGVPWQVVAETG
Ga0070715_103786672	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPKRNQAGQPGDGAPGPERPGWLFLAAAGVIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSQRGKMVPSARAADLRTLAGVPWQVVAETGQVFAL
Ga0070712_1009297451	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MARQHQAGRREDSGPGPERPRWLFLVTGGLVCAGALLGMWVVLAGQPDPQDLVAGSVAAVLAVGAGYLVSERGKMVPSLRAADLQTLAAVPWRVVAETGQVFALAARKAAGRPVAP
Ga0070712_1014883211	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQTGQLGISAPGPERPGRLSLAAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLVGVPWQVVAET
Ga0070765_1001573882	3300006176	Soil	MSKRNQAGRRGDGTPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDVQDLVVGSAAAVLAVGTGYLVSERGKMVPSARVADLRTLAGVPWQVVA*
Ga0070765_1018207252	3300006176	Soil	MSKQHQTSRRENSTPGPERPSWLFLVTGGLVYAGALLGMWIVLAGQPDAQDLAVGSVAAVVAVSVGYLLSQRGKMVPSVQAADLRTLAAVPWQVVVETGQVFALAAR
Ga0097621_1002348681	3300006237	Miscanthus Rhizosphere	MSKRNQTGQLGASAPGPERPGWLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLVGVP
Ga0097621_1013607751	3300006237	Miscanthus Rhizosphere	MSKRNQTGQLGISAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLVGVP
Ga0079222_107664902	3300006755	Agricultural Soil	MSKRNQTGQPGVNASGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSAAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAE
Ga0079221_100433412	3300006804	Agricultural Soil	MSQRNQTGQPGVSASGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSAQVADLRTVVGVPWQVVAETGQVFALAARKAVGRPV
Ga0079220_103343392	3300006806	Agricultural Soil	MSQRNQTGQPGVSASGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAE
Ga0079220_106064753	3300006806	Agricultural Soil	MSKRNQTGQLGASAPGPERPGWLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLVGV
Ga0079220_117117841	3300006806	Agricultural Soil	MPERRRASQPEADASGPKRPGWPFLIAGGLIYAGTLLGMWIVLAGQPDIQDLVVGSAAAVIAVGAGYLVSERGTMVPSARAADLQTLARVPWQVVAETGQVFALAARKAAGREV
Ga0075426_110106612	3300006903	Populus Rhizosphere	MPKRNQAGQRGDGTPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDVQDLVVGSAAAVLAVATGYVVSGRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAVGRPVAPG
Ga0134126_116011672	3300010396	Terrestrial Soil	MSKRNQAGQRGDGTPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDVQDLVVGSAAAVLAVGTGYLVSERGKMVPSARVADLRTLAGVPWQVVAET
Ga0126350_117735031	3300010880	Boreal Forest Soil	LAERGDQARRREESAPGPERPRWPFLVAGALVYAGALLGVWIVLAGEPDVSDLIAGSVAAVLSVGVGFFLSERGKMVPGLRAGDVRALAAVPWQVVAE
Ga0157370_108086212	3300013104	Corn Rhizosphere	MPKRNQAGQPGDDAPGPERPGCLFLAAAGLIYAGALLGMWIVLAGQPDVQDLVVGSAAAVLAVGTGYLVSERGKMVPSARVADLRTLAGVPWQLVAETGQVFARAARKAAGRPVA
Ga0187822_101773572	3300017994	Freshwater Sediment	MSKRNQAGRPEDGAPGPERPGWLFLAAAGLIYAGALLGMWIMLAGQPDVQDLVVGSVAAVLAVGTGYLVSQRGKMVPSVRVADLRT
Ga0066662_111477532	3300018468	Grasslands Soil	MSKRSQAGRRGDGAPGPERPGWLFLAAAGLMYAGALLGMWIVLAGQPDIQDLVVGSAAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALA
Ga0206351_105874184	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRHQAGPRVDSAPGPERPRWLFLATGGLVYAGALLGMWIVLAGQPGTQDLVGGSVAAVLATGVGYLVSERGKMVPSVRAADLRTLAAVPRQVVAGTGQVFALAARKASGRPVPPGALCTVPLDAE
Ga0210395_104344261	3300020582	Soil	MSRQHQAGRPGDRAPGPERPGWLVLVAGGLAYAGVLLGVWIVLAGQPDAQDLVSGSVAAVLAVGVGYLISQRGRMVPSVRAADLRTLAAVPWKVVAETGQVFALAARKAS
Ga0210395_108739302	3300020582	Soil	VRERGDQSRRRGEGATEPERPRWPILVAGGLVYAGALLGVWIVLAGEPDVSDLIAGSAAAVFSVGVGYFLSERGKMVPGLRVGDVRALATVPWQVVVESGQVLALAARKAAGRPTA
Ga0210404_100400921	3300021088	Soil	MPKRNQAGQPGDGAPGPERPGWLFLAAAGVIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSQRGKMVPSARIADLRTLAGVPWQVVAE
Ga0210388_116194041	3300021181	Soil	MSRQHQAGPREDSAPGPERPGWLFLATGGLVYVGALLGMWIVLAGQPDAQDLAAGSVAAVLAVGVGYRISERGKMVPSVRAADLRTLAAVPWQVVVETGQVFALAARKASGRPAAPGALR
Ga0210393_112381241	3300021401	Soil	MPERGEARRPGASVPGPKRPRWPLLVAGGLVYAGALLGVWIVLAGEPDTTDLIAGSAAAVFSVVVGYFLSDRGTMVPALRAGDARTLAAVPW
Ga0210397_115806251	3300021403	Soil	VRERGDQARRRAEAAPGPERPQWPFLVAGGLVYAGALLGVWIVLAGEPDVSDLIAGSVAAVFAVGVGYFLSERGKMVPVLRAADVRVVAAVPWQVVAESGQVLALAARKAAGRPTAPGALRT
Ga0210386_104673781	3300021406	Soil	MSRQHQAGRREDGAPGPERPRWLFLVTGGLVYAGALLGTWIVLAGQPDLQDLTAGSVAAVLAVGFGYLFSQRGKMVPSVRAADLRTLAVVPWQVIVETGQVFALAAR
Ga0210386_112473221	3300021406	Soil	MSRHHQTSRRENSTPGPERPRWLFLVAGGLVYAGVLLGMWIVLAGQPDAQDLAVGSVAAVLAVGVGYLLSQRGKMVPSLRSADLRMLAAVPWQVVVETGQ
Ga0210398_113396642	3300021477	Soil	MSRQHQAGRREDGAPGPERPRWLFLVTGGLVYAGALLGTWIVLAGQPDLQDLTAGSVAAVLAVGFGYLFSQRGKMVPSVRAADLRTLAVVPWQVIVETGQVFALAARKASGRPT
Ga0179589_100608322	3300024288	Vadose Zone Soil	MSTRNQAGQRGDGTPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDVQDLVVGSAAAVLAVGTGYLVSERGKMAPSARVADLRTLAGVPWQVV
Ga0207653_102316781	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQTGQLGASAPGPERPGWLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLHTLAGVPWQVVAETGQVFALAARKAVGRPVAPGALC
Ga0207692_103042282	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPERRRASQPEADASGPKRPGWPFLIAGGLIYAGTLLGMWIVLAGQPDIQDLAVGSAAAVLAVGAGYLVSERGTMVPSARAADLRTLARVPWQVVAETGQV
Ga0207692_110141551	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQAGQRGDGAPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDVQDLVVGSAAAVLAVGTGYLVSERGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAAGRP
Ga0207647_104417211	3300025904	Corn Rhizosphere	MSKRNQTGQPGVSAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAV
Ga0207699_107119611	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQTGQLGASAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAA
Ga0207671_108194851	3300025914	Corn Rhizosphere	MSKRNQTGQPGVSAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSAQVADLRTVVGVPWQVVAETG
Ga0207693_101317533	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MADQSPGSDAGRRDVPGPERPSRLFLVTGGLVYAGALLGMWIMLAGQPDAQDLVAGSAAAVLAVGVGYLLSQRGMMVPSARAADLRTLAAVPWQVVTETGQVFALAARKAAGRPDARGSL
Ga0207693_107651582	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPKRNQAGQPGDGAPGPERPGWLFLAAAGVIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSQRGKMVPSARVADLRTLAGVPWQVVAETGQVFAL
Ga0207663_101950851	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRNQTGQLGASAPGPERPGWLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAVGRPVAPG
Ga0207660_111234731	3300025917	Corn Rhizosphere	MSKRNQTGQLGASAPGPERPGWLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAVGRPVAPGA
Ga0207650_113811631	3300025925	Switchgrass Rhizosphere	MSKRNQTGQLGASAPGPERPGWLSLVAGGLIYAGALLGMWIVLAGQPDIQDPVVGSVAAVLAVGTGYLVSDRGKMVPSAQVADLRTVVGVPWQ
Ga0207700_103788141	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAKQNPGREAGRRDVPGPERPRWLFLVIGGLVYAGALLGMWIVLAGQPDVQDLAAGSAAAVLAVGVGYLLSQRGKMVPSVRAADLRTLAGVPWQVVTETGQVFALAARKASGRP
Ga0207664_107117191	3300025929	Agricultural Soil	VSIEPDHSPGGEPTPERCRASQREAGASGPKRPGWPFLIAGGLIYAGALLGMWIVLAGQPDIQDLVVGSAAAVIAVGAGYLVSERGTMVPSARAADLRTLARVPWQVVTETGQVFALAAR
Ga0207686_106805121	3300025934	Miscanthus Rhizosphere	MSKRNQTGQLGASAPGPERPGWLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAVGR
Ga0207679_102412663	3300025945	Corn Rhizosphere	MSKRNQTGQPGASAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFA
Ga0207712_120673951	3300025961	Switchgrass Rhizosphere	MSKRNQTGQLGISAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSAQVADLRTVVGVPWQVVAET
Ga0207677_113474181	3300026023	Miscanthus Rhizosphere	MSKRNQTGQLGVGAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAVGRPV
Ga0207675_1020293331	3300026118	Switchgrass Rhizosphere	MSKRNQTGQLGISAPGPERPGQLSLAAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLVGVPWQVVAETGQVFAVAARK
Ga0207698_116915701	3300026142	Corn Rhizosphere	MSKRNQTGQPGVSAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAA
Ga0257156_10984481	3300026498	Soil	MSTRNQAGQQGDGTPGPERPGWLFLAAAGLIYAGVLLGMWIVLAGQPDVQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQ
Ga0209326_10174531	3300026899	Forest Soil	MSQPNQAGQPRASAPGPERPGWPLLVAGGLIYAGALLGMWIVLAGQPDVQDLIGGSAAAVLAVGVGYLVSQRGKMVPSVRVADLRMLAAVPWQVVVET
Ga0209111_10098612	3300027058	Forest Soil	MSRQHQAGQPEDGAPGPERSGWLFLVIAGLVYAGALLGMWIVLAGQPDAQDLVAGSAAAVVAVGAGYLISQRGRMVPSVRAADLRTLAVVPWRVLAETGQVFALAA
Ga0209522_10069651	3300027119	Forest Soil	MSRQDQAGQPEDGAPGPERPGWLFLVIAGLVYAGVLLGIWIVLAGEVDAQDLVFGSVAAVLAVGAGYLFSQRGRMVPSVRASDLRTLAVVPWRVVVETGQVFALAVRKVSGRPTAPGAL
Ga0209116_11188331	3300027590	Forest Soil	MARRHQTGRRGDSAPGLERPRWLFLVTGGLVYSGALLGMWIVLAGQPDAQDLALGSVAAVLAVGVGYLLSQRGKMVPSVQAADLRTLAAVPWQVVVE
Ga0209178_10232281	3300027725	Agricultural Soil	MSQRNQTGQPGVSASGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLA
Ga0209073_100447662	3300027765	Agricultural Soil	MSQRNQTGQPGVSASGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETG
Ga0209073_103880811	3300027765	Agricultural Soil	VSIEPDHSPGGEPAPERCRASQREAAASGPKRPGWPFLIAGGLIYAGTLLGMWIVLAGQPDIQDLVVGSAAAVVAVGAGYLVSGRGTMVPSARAADLRILARVPWQVV
Ga0209112_100341351	3300027817	Forest Soil	MPGQRQTSQPENSTPGPKRPRWRYLVTGGLVYAGVLLGIWIVLAGEVDVQDLVIGSVSAVVSVGAGYLVSQRGQMVPNVRAADLRTLAAVPWRVVAETGQVFAFAARKAAGQPVAGGRL
Ga0209275_103837111	3300027884	Soil	MSRQHQAVRREGSVPGPERPRWLFLVIGGLIYAGALLGMWIVLAGQPDVQDLAAGSVAAVLAVGVGYLISQRGRMVPSVRAADLRTLAAVPWQVVAETGQVFALAARKASGRPVAPGALCTV
Ga0265334_101170782	3300028573	Rhizosphere	MANHNPGEHAGPERHSAPGPERPRLLFLVTGGLVYAGALLGMWVVLAGQPDAQDLVAGSAAAVLAVGIGYFLSERGRMVPSLRAADLRTLAAVP
Ga0307303_101351182	3300028713	Soil	MSKRNQTGQLGISASGPERPGWLSLVAGGLIYAGALLGMWIVLAGQPDMQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAARKAVGRPVAP
Ga0302232_106580372	3300028789	Palsa	MPERGRARRPAASGPGPKRPRWWSLLAGGLVYAGALLGMWIVLAGEPDVSDLIAGSAAAVFAVGVGYFLSERGTMVPGLRAADVRVLAAVPWQLVAESWQVFALAARKAAGRPIAA
Ga0307310_103851961	3300028824	Soil	MSKRNQTGQLGVSAPGPERPGRLSLVAGGLIYAGALLGMWIVLAGQPDTQDLVVGSVAAVLAVGTGYLVSDRGKMVPSARVADLRTLAGVPWQVVAETGQVFALAAR
Ga0311340_109267171	3300029943	Palsa	MSRRRRTGRGDSAPGPERPSWLSLMAGGLVYAGALLGMWIVLAGQPDAQDLVAGSVAAVLAVGVGYLVSQRGRMVPGVRAADLQTLAAVPWQVVVETGQVFALAARKA
Ga0311338_110358112	3300030007	Palsa	MSRRHQAAWRGESAPGPERPRLLFLVTGGLVYAGVLLGVWIVLAGEPDAQDLVAGSVAAVLAVGFAYFVSQRGSMVPSVRAADLRTLAAVPWQVVVETGQVFALAARKASGRPTAPGELRTVPLDAG
Ga0302178_103228292	3300030013	Palsa	MSRRHQAAWRGESAPGPERPRLLFLVTGGLVYAGVLLGVWIVLAGEPDAQDLVSGSVAAVLAVGFAYFVSQRGSMVPSVRAADLRTLAAVPWQVVVET
Ga0311372_129272342	3300030520	Palsa	VPDRGDQARRRGESAPGPERPRWPFLAAGGLVYAGALLGLWIVLAGEPDVSDLIAGSAAAVFSVGAGYFLSERGKMVPVLRAADVRALAAVPWQVVVE
Ga0311356_118854101	3300030617	Palsa	MSRRHQTGRRGDSAPGLERPRWLFLVTGGLVYAAALLGMWIVLAGQPDAQDLAVGSVAAVLAVGVGYLLSQRGKMVPSVRAADLRTLAAVPWQVVVETGQVFALAARK
Ga0170824_1155571681	3300031231	Forest Soil	MSKRNQAGQRGDGAPGPERPGWLFLAAAGLIYAGALLGMWIMMAGQPDVQDLVVGSVAAVLAVSTGYLVSERGKMVPSTRVADLRTLAGVPWQVVAET
Ga0170819_117073631	3300031469	Forest Soil	MSKRNQAGQRGDGAPGPERPGWLFLAAAGLIYAGALLGMWIVLAGQPDVQDLVVGSVAAVLAVSTGYLVSERGKMVPSTRVADLRTLAGVPWQVVAET
Ga0302326_115713731	3300031525	Palsa	MPERGRARRPGASGPGPKRPRWWFLLAGGLVYAGALLGVWIVLAGEPDVSDLIAGSAAAVFAVGVSYFLSERGTMVPALRAADVRVLAAVPWQLVAESWEVFALAARKAAGRP
Ga0265314_100106577	3300031711	Rhizosphere	MSERDEAGRREDSPPGPERPRWLFLVTGGLIYAGALLGMWIVLAGQPDPQDLAAGSIAAVLAVGVAYFLSERGRMVPSLRAADLRTLAAVPWKVVAETGQVFALAARKASGRPAGPGALL
Ga0265342_100256071	3300031712	Rhizosphere	MSERDEAGRREDSPPGPERPRWLFLVTGGLIYAGALLGMWIVLAGQPDPQDLAAGSIAAVLAVGVAYFLSERGRLVPSLRAADLRTLAAVPWKVVAETGQVFALAARKASGRPAGP
Ga0307472_1004812691	3300032205	Hardwood Forest Soil	MPKRNQAGQPGDGAPGPERPGWLFLAAAGVIYAGALLGMWIVLAGQPDIQDLVVGSVAAVLAVGTGYLVSQRGKMVPSARIADLRTLAGVPWQVVAETGQVLTLAARKAAGRP
Ga0335085_105559721	3300032770	Soil	MSQRNQAGQRGASAPGPERPGWPFLVASGLICASTLLGMWIVLAGQPDVQDLVAGSAAAVLAVGVGYLVSQRGKMVPSVRVADLRMLAAVPWRLMRRRCW
Ga0335080_111475562	3300032828	Soil	MSQRNQAGQPRASAPGPERPGWPLLVAGGLIYAGALLGMWIVLARQPDVQDLVAGSAAAVLAVGVGYLVSQRGKMVPSVRVADLRMLAAVPW
Ga0335074_103660693	3300032895	Soil	MPERGEAHRPEAGAPGGGTPGSERPRWPVLVAGGLVYAGALLGMWIVLAGEPDAQDLVAGSVAAVLAVGAGYALSGRGKMVPGLRPADVRT
Ga0335072_117254281	3300032898	Soil	MSRQHQAGRREDGVPRPGRPKWLFLVTGGLVYVGALLGMWIVLAGQPDTQDLVAGSVAAVLAVGVGYLISQRGKMVPSVRAADLRTLAAVPWRVLVETGQVFALAARKGSGRSTASGALRTVPLDA
Ga0335077_121159051	3300033158	Soil	MSQRNQAGQRGASAPGPERPGWPFLVAGGLICASALLGMWIVLAGQPDVQDLVAGSAASVLAVGVGYLVSQRGKMVPSVRVADLRRLAAVPWQVVAETGQVFALA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F105988

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences